Template-based Modeling Results for QMCA_ECOLI

Submitted Primary Sequence

>Length 305
MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMPLEASSLMGSIAGIAELVKDSANKRTQP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMPLEASSLMGSIAGIAELVKDSANKRTQP
CHHHHHHHHHHHHHHHHCEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECEEEEEEEEEEEEEEECCCCCEEEECCCEEEEEEEEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMPLEASSLMGSIAGIAELVKDSANKRTQP
22100000000000000100100231220001100312322210000000000200110101111021212200022202020000000101000200130220210012000120021112131320022132012301300120043110200101022031223012102211312222102113121221021121212211211312022101112121222112111200210020132232201101002200200230134331200000110110010010002104322344344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMPLEASSLMGSIAGIAELVKDSANKRTQP
1	MUSTER	2rpbA	0.487	0.370	1.264	threading_1	------------------------------------------------------GSDHVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQVIDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINARLREELDKITDRWGVKITRVEIQRIDPPKD------------------------------------------------------------------------------------------------------------------------------------------
2	PROSPECT2	1pieA	0.084	0.977	1.436	threading_2	TVLSALTEKFAEVFGDTKEVEYF--FSPGRINLIGEHTDY--NGGYVFPASITIGTTGLA---RLREDKKVKLYSENFIEFDLDEVFELLIKGEIPTASGLSSSASLELLVGVVLDDLFNLNVPRLELVQLGQKTENDYILDQFAIGFGEVKKAIELDIMNTNKPRALTESKYNERFAETREALKRMQTRIQSLGELSNEEFDANTDLIGDETLIKRARHAVYENNRTKIAQKAFVAGNLTKFGELLNASHASLKDLELDTLAETAQKQAGVLGARMTGAHDNVSAFRKAVGQVYEEVVGYPAKL
3	HHPRED-l	2zuo_A	0.153	0.898	2.428	threading_3	MLLGVEELLN--------VSYRVPHNAAVQVYDYKRARVVFGPELVTLDPE-EQFT-VLSRRALCLLLGVITIETADHARLQLQLAYNWHFENRAAKLFSVPDFVGDACKAIASRVRGAVASVTFDDFHKNSARIIRMVFG----VFPQNGLVVSSVDVQSVEPVDQLQRSVQIEAAAKHEAQRLEQEARGRLERQKILDQSEAENAKAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAELERVKKVREMELIYKFTGTIRDLAVAPKSTLITDGSSPINLFSTA-----------------
4	MUSTER	3bk6A	0.391	0.554	1.894	threading_4	--------------------------------------------------MIFEKAVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAMARQAEAERERRARITLAEAERQAAEKLREAAEIISE-----PMALQLRTLQT---------------------------------------------------------------------------------
5	SPARKS	3bk6a	0.402	0.554	3.870	threading_5	--------------------------------------------------MIFEKAVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAMARQAEAERERRARITLAEAERQAAEKLREAAEIISHPMALQLRTLQT--------------------------------------------------------------------------------------
6	PROSPECT2	3bk6A	0.412	0.557	2.760	threading_6	M--------------------------------------------------IFEKAVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAMARQAEAERERRARITLAEAERQAAEKLREAAEI---------------------ISEHPMALQLRT----------------------------------------------------------------LQT
7	PPA-I	3bk6A	0.388	0.557	3.053	threading_7	--------------------------------------------------MIFEKAVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAMARQAEAERERRARITLAEAERQAAEKLREAAEIISEH----PMALQLRTLQT---------------------------------------------------------------------------------
8	HHPRED-l	3bk6_A	0.412	0.557	5.821	threading_8	-------------------------------------------------MIFEKA-VIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAMARQAEAERERRARITLAEAERQA---------------------------------AEKLREAAEIISEHP---------MALQLRTLQT-------------------------------------------
9	HHPRED-g	3bk6_A	0.400	0.557	5.871	threading_9	-------------------------------------------------MIFEKA-VIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAMARQAEAERERRARITLAEAERQAAE---------------KLREAAEIISEH------------------------P---MALQLRTLQT-------------------------------------------
10	SP3	3bk6a	0.388	0.557	2.969	threading_10	-----------------------------------------------MI--FEKA-VIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAMARQAEAERERRARITLAEAERQAAEKLREAAEIISE----HPMALQLRTLQT---------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.447 to 1winA SCOP code=d.43.2.1	TM-score=0.636 to 1pieA SCOP code=d.14.1.5	TM-score=0.447 to 1winA SCOP code=d.43.2.1	TM-score=0.439 to 2r2vA SCOP code=h.1.3.1	TM-score=0.534 to 1winA SCOP code=d.43.2.1