Template-based Modeling Results for PYRF_ECOLI

Submitted Primary Sequence

>Length 245
MTLTASSSSRAVTNSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQRSA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTLTASSSSRAVTNSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQRSA
CCCCCCCCCHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECHHHHHHCCHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEECCHHHHHHHCCCEEEECHHHCCCCCHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTLTASSSSRAVTNSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQRSA
55332222232222210000011221310120023024210001001200111023002102321110001010010110001001000300010000000002400110220013114321000000011223121012121222122002200110241222000011210220131123200000100323223223221010132013111000000110031211120032012103434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTLTASSSSRAVTNSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQRSA
1	MUSTER	3ru6A	0.338	0.894	2.845	threading_1	-------------AMKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFIEELKKVDFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHASAGKIAIQEVMTRLSKFSK-RPLVLAVSALTSFDEENFFSI-YRQKIEEAVINFSKISYENGLDGMVCSVFESKKIKEHTSSNFLTLTPGIRP--------FGVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKIH---
2	SPARKS	3uwqa	0.689	0.906	5.178	threading_2	------------NDPKVIVALDYDNLADALAFVDKIDPSTCRLKVGKEMFTLFGPDFVRELHKRGFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHASGGERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAPQDHVLRLATLTKNAGLDGVVCSAQEASLLKQHLGREFKLVTPGIRP-------ARRIMTPAQAIASGSDYLVIGRPITQAAHPEVVLEEINSSL----
3	PROSPECT2	3ru6A	0.329	0.894	4.170	threading_3	-------------AMKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFIEELKKDDFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHASAGKIAIQEVMTRLSK-FSKRPLVLAVSALTSFDEENFFSI-YRQKIEEAVINFSKISYENGLDGMVCSVFESKKIKEHTSSNFLTLTPGIRP--------FGVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKI---H
4	PPA-I	3ru6A	0.329	0.894	2.910	threading_4	-------------AMKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFIEELKKVDFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHASAGKIAIQEVMTRLSK-FSKRPLVLAVSALTSFDEENFFSI-YRQKIEEAVINFSKISYENGLDGMVCSVFESKKIKEHTSSNFLTLTPGIRP--------FGVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKIH---
5	HHPRED-l	1eix_A	1.000	0.943	3.342	threading_5	-----------VTNSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQ---
6	HHPRED-g	3ldv_A	0.693	0.943	3.306	threading_6	----------AMNDPKVIVALDYDNLADALAFVDKIDPSTCRLKVGKEMFTLFGPDFVRELHKRGFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHASGGERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAPQDHVLRLATLTKNAGLDGVVCSAQEASLLKQHLGREFKLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQAAHPEVVLEEINSSL----
7	SP3	3uwqa	0.685	0.906	5.190	threading_7	------------NDPKVIVALDYDNLADALAFVDKIDPSTCRLKVGKEMFTLFGPDFVRELHKRGFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHASGGERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAPQDHVLRLATLTKNAGLDGVVCSAQEASLLKQHLGREFKLVTPGIR-------PARRIMTPAQAIASGSDYLVIGRPITQAAHPEVVLEEINSSL----
8	SAM-T99	1eixC	1.000	0.939	4.992	threading_8	-----------VTNSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASL----
9	MUSTER	1eixC	1.000	0.947	2.835	threading_9	-----------VTNSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQR--
10	SPARKS	3ru6a	0.329	0.894	4.934	threading_10	-------------AMKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFIEELKKDDFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHASAGKIAIQEVMTRLSK-FSKRPLVLAVSALTSFDEENFFSI-YRQKIEEAVINFSKISYENGLDGMVCSVFESKKIKEHTSSNFLTLTPGIRPF--------GVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKIH---

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.888 to 1eixC TM-score=0.911 to native SCOP code=c.1.2.3	TM-score=0.884 to 1eixC TM-score=0.907 to native SCOP code=c.1.2.3	TM-score=0.899 to 1eixC TM-score=0.922 to native SCOP code=c.1.2.3	TM-score=0.885 to 1eixC TM-score=0.908 to native SCOP code=c.1.2.3	TM-score=0.885 to 1eixC TM-score=0.908 to native SCOP code=c.1.2.3

Experimental Structure

Download 1eixC

SCOP code=c.1.2.3