Template-based Modeling Results for PUUD_ECOLI

Submitted Primary Sequence

>Length 254
MENIMNNPVIGVVMCRNRLKGHATQTLQEKYLNAIIHAGGLPIALPHALAEPSLLEQLLPKLDGIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMAIINAALERRIPIFAICRGLQELVVATGGSLHRKLCEQPELLEHREDPELPVEQQYAPSHEVQVEEGGLLSALLPECSNFWVNSLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHPFALGVQWHPEWNSSEYALSRILFEGFITACQHHIAEKQRL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MENIMNNPVIGVVMCRNRLKGHATQTLQEKYLNAIIHAGGLPIALPHALAEPSLLEQLLPKLDGIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMAIINAALERRIPIFAICRGLQELVVATGGSLHRKLCEQPELLEHREDPELPVEQQYAPSHEVQVEEGGLLSALLPECSNFWVNSLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHPFALGVQWHPEWNSSEYALSRILFEGFITACQHHIAEKQRL
CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCEECCCEEEEECCCCCHHHHHCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MENIMNNPVIGVVMCRNRLKGHATQTLQEKYLNAIIHAGGLPIALPHALAEPSLLEQLLPKLDGIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMAIINAALERRIPIFAICRGLQELVVATGGSLHRKLCEQPELLEHREDPELPVEQQYAPSHEVQVEEGGLLSALLPECSNFWVNSLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHPFALGVQWHPEWNSSEYALSRILFEGFITACQHHIAEKQRL
55322310000000123313121010012200200140100000002112222002200230100000102120202001331343311211010100002001324100000020000000100021123113233213233223122322112112020242010010023121010001002003212420101010331001001024120000010002131231221220020002002212243454
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MENIMNNPVIGVVMCRNRLKGHATQTLQEKYLNAIIHAGGLPIALPHALAEPSLLEQLLPKLDGIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMAIINAALERRIPIFAICRGLQELVVATGGSLHRKLCEQPELLEHREDPELPVEQQYAPSHEVQVEEGGLLSALLPECSNFWVNSLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHPFALGVQWHPEWNSSEYALSRILFEGFITACQHHIAEKQRL
1	MUSTER	3fijG	0.381	0.846	2.803	threading_1	-----LKPVIGITGN-------------QRYVDAIQKVGGFPIALPI--DDPSTAVQAISLVDGLLLTGG-QDITPQLYLEEPSQGAYFPPRDSYEIALVRAALDAGKPIFAICRG-QLVNVALGGTLYQDISQVETALQHLQR-----VDEQLGSHTIDIEPTSELAKHHPNK--KLVNSLHHQFIKKLAPSFKVTARTADG-IEAVEGDNLPWYLGVQWHPELFQT-DPESEQLFQALVDESKK--------
2	SPARKS	3fija	0.369	0.854	3.986	threading_2	-----LKPVIGITGQ-------------QRYVDAIQKVGGFPIALPI--DDPSTAVQAISLVDGLLLTGGQ-DITPQLYLEEPSQGAYFPPRDSYEIALVRAALDAGKPIFAICRG-QLVNVALGGTLYQDISQVETKALQHLQR----VDEQLGSHTIDIEPTSELAKHHPNKKL--VNSLHHQFIKKLAPSFKVTARTADG-IEAVEGDNLPWYLGVQWHPELFQT-DPESEQLFQALVDESKKT-------
3	PROSPECT2	3fijA	0.369	0.854	3.761	threading_3	L-----KPVIGITGQ-------------QRYVDAIQKVGGFPIALPID--DPSTAVQAISLVDGLLLTGGQ-DITPQLYLEEPSQEAYFPPRDSYEIALVRAALDAGKPIFAICRG-QLVNVALGGTLYQDISQVETKALQHLQRVDEQL----GSHTIDIEPTSELAKHHPNK--KLVNSLHHQFIKKLAPSFKVTARTADGI-EAVEGDNLPWYLGVQWHPELF-QTDPESEQLFQALVDESK-------KT
4	PPA-I	3fijG	0.361	0.850	4.470	threading_4	-----LKPVIGITGN-------------QRYVDAIQKVGGFPIALPIDDPS--TAVQAISLVDGLLLTGGQ-DITPQLYLEEPSQGAYFPPRDSYEIALVRAALDAGKPIFAICRG-QLVNVALGGTLYQDISQVETKALQHLQRVDEQ----LGSHTIDIEPTSELAKHHPNK--KLVNSLHHQFIKKLAPSFKVTARTADG-IEAVEGDNLPWYLGVQWHPELFQT-DPESEQLFQALVDESKK--------
5	HHPRED-l	3fij_A	0.380	0.850	3.504	threading_5	----L-KPVIGITG-------------QQRYVDAIQKVGGFPIALPID--DPSTAVQAISLVDGLLLTGGQ-DITPQLYLEEPSQGAYFPPRDSYEIALVRAALDAGKPIFAICRG-QLVNVALGGTLYQDISQVEKALQHLQR-----VDEQLGSHTIDIEPTSELAKHHPN-KKL-VNSLHHQFIKKLAPSFKVTARTADG-IEAVEGDNPSWYLGVQWHPEL-FQTDPESEQLFQALVDESKKT-------
6	HHPRED-g	3fij_A	0.380	0.850	4.298	threading_6	-----LKPVIGITG-------------QQRYVDAIQKVGGFPIALPI-D-DPSTAVQAISLVDGLLLTGGQ-DITPQLYLEEPSQGAYFPPRDSYEIALVRAALDAGKPIFAICRG-QLVNVALGGTLYQDISVETKALQHLQRVDEQL-----GSHTIDIEPTSELAKHHPN-KKL-VNSLHHQFIKKLAPSFKVTARTADG-IEAVEGDNPSWYLGVQWHPEL-FQTDPESEQLFQALVDESKKT-------
7	SP3	3fija	0.373	0.854	3.976	threading_7	-----LKPVIGITGQ-------------QRYVDAIQKVGGFPIALPI--DDPSTAVQAISLVDGLLLTGGQ-DITPQLYLEEPSQGAYFPPRDSYEIALVRAALDAGKPIFAICRG-QLVNVALGGTLYQDISQVETKALQH----LQRVDEQLGSHTIDIEPTSELAKHHPNK--KLVNSLHHQFIKKLAPSFKVTARTADG-IEAVEGDNLPWYLGVQWHPELFQTDP-ESEQLFQALVDESKKT-------
8	SAM-T99	3fijG	0.386	0.846	6.530	threading_8	-----LKPVIGITGNQR-------------YVDAIQKVGGFPIALP--IDDPSTAVQAISLVDGLLLTGGQ-DITPQLYLEEPSQGAYFPPRDSYEIALVRAALDAGKPIFAICRG-QLVNVALGGTLYQDISVETKALQH-----LQRVDEQLGSHTIDIEPTSELAKHHPN--KKLVNSLHHQFIKKLAPSFKVTARTADG-IEAVEGDNLPWYLGVQWHPELFQ-TDPESEQLFQALVDESKK--------
9	MUSTER	1l9xB	0.191	0.929	1.714	threading_9	VPRGAKKPIIGILMQNKVMKNYGRYYIAASYVKYLESAGARVVPVRL-DLTEKDYEILFKSINGILFPGGSVDLRRSDYAK--------VAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFTGGQLH-----SRMFQNFPTELLLSLAVEP---LTANFHKWSLSVKKKFFNVLTTNTDGFISTMEGYKYP-VYGVQWHPEYEWKNLKTAFYLAEFFVNEARKNESEEEKA
10	SPARKS	1s1ma	0.241	0.898	3.434	threading_10	EANPVSEVTIGMVGKYIELPDAY-----KSVIEALKHGGRVSVNIKLIDSQDVETREILKGLDAILVPGG--------FGYRG---------VEGMITTARFARENNIPYLGICLGMQVALIDYARHVVPDCKYPVALITEWRDENGNVETMRLGAQQCQLVDDSLVRQLYN-APTIVERHRHRYEVNNMDAGLRVAGRSGDDLVEIIEVPNHPWFVACQFHPEFTSTPR-DGHPLFAGFVKAASEFQKRQA--

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.766 to 2a9vD SCOP code=c.23.16.1	TM-score=0.761 to 2a9vD SCOP code=c.23.16.1	TM-score=0.779 to 2a9vD SCOP code=c.23.16.1	TM-score=0.767 to 2a9vD SCOP code=c.23.16.1	TM-score=0.766 to 2a9vD SCOP code=c.23.16.1