Template-based Modeling Results for PSTC_ECOLI

Submitted Primary Sequence

>Length 319
MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIISSWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGALFSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIISSWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGALFSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIISSWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGALFSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR
5533332233213212100000010000000000000001001200100230001000233121233210000000000000000000000000000000120022101300010020011000000000000000100010012000210231110011112221010000000000010011001002300340122012001001011110012000100110000000000010001000000000102302110111201100000012012132011000001000000000000100020001211333244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIISSWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGALFSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR
1	MUSTER	3d31C	0.194	0.777	1.364	threading_1	-------------PLTFVFSFLLLVLFLFIFLTLSNMIFEQITEDFSGLVKAAGN--------RS-----VISSIFLSLYAGFLATLLALLLGAPTGYILARF-DFPGKRLVESIIDVPVVVPHTVAGIALLTVFGS---------------RGLIGEPLESYIQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPM------------VGPTLIYDRFISYGLSA----SRPIAVLLILVTLSIFLVIR-------------
2	SPARKS	3d31c	0.178	0.774	3.687	threading_2	--------------------PLTFVFSFLLLVLFLFIFLTLSNMIFEQITE-DFSGLVKAAGNRS-----VISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPG-KRLVESIIDVPVVVPHTVAGIALLTVF----------------GSRGLIGEPLESYQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYP------------MVGPTLIYDRFISYG----LSASRPIAVLLILVTLSIFLVIR-------------
3	PROSPECT2	2onkC	0.198	0.790	1.592	threading_3	M--------------RLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEF-LKAASDPA---------VWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPG-KSVVEGIVDLPVVIPHTVAGIALLVVF-----------------GSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYP------------MIAPTLIYERYLSEG----LSAAMPVAAILILLSLAVFVALRII---------VG
4	PPA-I	3d31C	0.194	0.777	3.168	threading_4	-------------PLTFVFSFLLLVLFLFIFLTLSNMIFEQITEDFSGLVKAAGNRS-------------VISSIFLSLYAGFLATLLALLLGAPTGYILARFDF-PGKRLVESIIDVPVVVPHTVAGIALLTVFG---------------SRGLIGEPLESYIQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPMVGP---------TLIYDRFISYGLSA-------SRPIAVLLILVTLSIFLVIR-------------
5	HHPRED-l	3d31_C	0.173	0.777	4.929	threading_5	-----------------PLTF---VFSFLLLVLFLFIFLTLSNMIFEQI-TEDFSGLVKAAGNR-----SVISSIFLSLYAGFLATLLALLLGAPTGYILARF-DFPGKRLVESIIDVPVVVPHTVAGIALLTVFGSR-------------GLIGEPLESY--IQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYY-P-----------MVGPTLIYDRFISY----GLSASRPIAVLLILVTLSIFLVIR-------------
6	HHPRED-g	3d31_C	0.170	0.774	4.659	threading_6	-----------------PLTFVFFLLLVLFLFIFLTLSNMIF-EQI----TEDFSGLVKAAGN-----RSVISSIFLSLYAGFLATLLALLLGAPTGYILARF-DFPGKRLVESIIDVPVVVPHTVAGIALLTVFGSR--GLIGEPL----ES-------Y--IQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYY-PM-----------VGPTLIYDRFISY----GLSASRPIAVLLILVTLSIFLVIR-------------
7	SP3	3d31c	0.178	0.774	3.075	threading_7	--------------------PLTFVFSFLLLVLFLFIFLTLSNMIFEQIT-EDFSGLVKAAGNRS-----VISSIFLSLYAGFLATLLALLLGAPTGYILARFDF-PGKRLVESIIDVPVVVPHTVAGIALLTVF----------------GSRGLIGEPLESYQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYP------------MVGPTLIYDRFISYG----LSASRPIAVLLILVTLSIFLVIR-------------
8	SAM-T99	3dhwA	0.190	0.627	2.317	threading_8	---------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIV-------------------------GTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLV----------------------NAATITL---------ITLVGYSAMGGAVGAGGLGQGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGD
9	MUSTER	2onkC	0.190	0.790	1.364	threading_9	--------------MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEF-LKAASDPA---------VWKVVLTTYYAALISTLIAVIFGTPLAYILARK-SFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGS------SGLIGSFSP-LKFV----------DALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYP---------MIAPTLIYERYLSEGLSA-------AMPVAAILILLSLAVFVALRIIVG---------
10	SPARKS	2onkc	0.187	0.787	3.528	threading_10	--------------------MRLLFSALLALLSSIILLFVLLPVAATVLQLFNFDEFLKAASDPA-----VWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPG-KSVVEGIVDLPVVIPHTVAGIALLVVF----------------GSSGLIGSFS-PLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYP------------MIAPTLIYERYLSEG----LSAAMPVAAILILLSLAVFVALRIIVG---------

Predicted Tertiary Structure


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TM-score=0.835 to 3d31C SCOP code=f.58.1.1	TM-score=0.837 to 3d31C SCOP code=f.58.1.1	TM-score=0.843 to 2onkC SCOP code=f.58.1.1	TM-score=0.822 to 2onkC SCOP code=f.58.1.1	TM-score=0.855 to 3d31C SCOP code=f.58.1.1