Template-based Modeling Results for PRPR_ECOLI

Submitted Primary Sequence

>Length 528
MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYSAATVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDMLGQSPQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCNLEEDMQQGRFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKVSLAALSAPFSAALRQGLQASETVLLHYDWPGNIRELRNMMERLALFLSVEPTPDLTPQFMQLLLPELARESAKTPAPRLLTPQQALEKFNGDKTAAANYLGISRTTFWRRLKS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYSAATVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDMLGQSPQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCNLEEDMQQGRFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKVSLAALSAPFSAALRQGLQASETVLLHYDWPGNIRELRNMMERLALFLSVEPTPDLTPQFMQLLLPELARESAKTPAPRLLTPQQALEKFNGDKTAAANYLGISRTTFWRRLKS
CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEECCCCCHHHHHHCCCCHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYSAATVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDMLGQSPQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCNLEEDMQQGRFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKVSLAALSAPFSAALRQGLQASETVLLHYDWPGNIRELRNMMERLALFLSVEPTPDLTPQFMQLLLPELARESAKTPAPRLLTPQQALEKFNGDKTAAANYLGISRTTFWRRLKS
553233233320000000002003002300420332010100120023002102320243301000000100010122030000002122220020012004212110012133112002212321302122212122220110023123301100000011021001001110000011103200110111122112221221123113332222200020220120120021004220100020222202100010013121123322222422000000000003200001011123101111332132010100310000001002011300120021123221121124220200000000121203211331311200100000020200112322110110020003100221323222214301320010013030100020021000100110223213311231132223322432232222112001200430312121003202011210132135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYSAATVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDMLGQSPQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCNLEEDMQQGRFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKVSLAALSAPFSAALRQGLQASETVLLHYDWPGNIRELRNMMERLALFLSVEPTPDLTPQFMQLLLPELARESAKTPAPRLLTPQQALEKFNGDKTAAANYLGISRTTFWRRLKS
1	MUSTER	1ny5B	0.305	0.720	2.635	threading_1	---------------------------------------------------------------------------------MNVLVIEDDKVFRGLLEEYLSMKGIESAERGKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPLEEIELTINKAIEHRKLRKENELLRREKDLKE--EEYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLS--------DRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSS-KEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKE----VEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIRGELSCLVN----------------------------------------------------
2	PROSPECT2	1ny5A	0.305	0.725	4.090	threading_2	M-----------NVLVIEDKVFRGLLEEYLSMKGI--KVESAER-----GKEAYKLLSEKHFNVVLL--------------------------------------------------------------DLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEEEYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKL--------SDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSS-KEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKE----VEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKF--------------------------------------------------IDRGELSCLV--
3	HHPRED-l	1ny5_A	0.315	0.716	5.809	threading_3	------------------------------------MNVLVIEDD-KVFRGLLEEYLSMKGIKVESAERGKEALLSEHFNVVLLDLLLPDVNGLEILKWIKERSPEIVITGHGTIKTAVEAM-KMGAYDFLTKPCML-E-----------------------------------------EIELTINKAIEHRKLRKENELL---RR--EKDLKEEEYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKL--------SDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSS-KEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAK----EVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV----------------------------------------------------
4	PROSPECT2	3dzdA	0.334	0.691	3.731	threading_4	-----------KRVLVVDEESITSSLSAILEE--EGYHPDTAKTL-----REAEKKIKELFFPVIVL---------------------------------------------------------------DVWPDGDGVNFIDFIKENSPDSVVIVITGHGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAFEE--------YSKKAPPQEEIEFVGEHPKILEIKRLIPKIAKSKAPVLITGESGTGKEIVARLIHRYS---------GRKGAFVDLNCASIPQELAESELFGHEKGAFTGALTR-KKGKLELADQGTLFLDEVGELDQRVQAKLLRVLETGSFTRLGGNQKIEVDIRVISATNKNLEEEIKKGNFREDLYYRLSVFQIYLPPLRERGKDVILLAEYFLKKFAKEYKKN----CFELSEETKEYL-KQEWKGNVRELKNLIERAVILCEGEVI-----------------------------------------------------------KP
5	SPARKS	1ojla	0.448	0.549	6.159	threading_5	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMIGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHAC--------SARSDRPLVTLNCAALNESLLESELFGHEKGAFTKR----REGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAEEVSAGRFRQDLYYRLNVVAIEMPSLRQRREDIPLLADHFLRRFAERNRKV----VKGFTPQAMDLLIHYDWPGNIRELENAIERAVVLLTGEYISELPLAI------AYSGEIQPLVDVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR
6	HHPRED-l	3dzd_A	0.345	0.676	3.063	threading_6	-----------KRVLVVDDEE--------------------------SITSSLSAILEEEGYHPDTAKTLREAKIKELFPVIVLDVW-PGVNFIDFIKENSP-DSVVIVIGHGSVDTA--------------------------VKA-------------------IKKGAYEFLEKPVERFLLTIKHAFEEYS-------------KKAPPQEEIEFVGEHPKILEIKRLIPKIAKSKAPVLITGESGTGKEIVARLIHRY--------SGRKG-AFVDLNCASIPQELAESELFGHEKGAFTGALT-RKKGKLELADQGTLFLDEVGELDQRVQAKLLRVLETGSFTRLGGNQKIEVDIRVISATNKNLEEEIKKGNFREDLYYRLSVFQIYLPPLRERGKDVILLAEYFLKKFAKEYK----KNCFELSEETKEYL-KQEWKGNVRELKNLIERAVILCEGEVIKP-----------------------------------------------------------
7	PPA-I	1ny5B	0.304	0.723	4.454	threading_7	---------------------------------------------------------------------------------MNVLVIEDDKVFRGLLEEYLSMKGIKVESAEREAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEEEYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLS--------DRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVS-SKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKE----VEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIRGELSCLVN----------------------------------------------------
8	HHPRED-g	1ny5_A	0.310	0.722	5.397	threading_8	------------------------------------------------------------------------------MNVLVIEDDKVFRGLLEEYLSMKGIKVES-AERGKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHLRKENELLRREKD--LKEEEYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKL--------SDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVS-SKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKE----VEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIRGELSCLV-----------------------------------------------------
9	SP3	1ojla	0.448	0.549	6.583	threading_9	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMIGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHAC--------SARSDRPLVTLNCAALNESLLESELFGHEKGAFTKR----REGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAEEVSAGRFRQDLYYRLNVVAIEMPSLRQRREDIPLLADHFLRRFAERNRKV----VKGFTPQAMDLLIHYDWPGNIRELENAIERAVVLLTGEYISELPLAI------AYSGEIQPLVDVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR
10	SAM-T99	1ojlD	0.441	0.562	5.959	threading_10	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMIGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACS--------ARSDRPLVTLNCAALNESLLESELFGHEKGAFTGADKR-REGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAEEVSAGRFRQDLYYRLNVVAIEMPSLRQRREDIPLLADHFLRRFAERNRKVV----KGFTPQAMDLLIHYDWPGNIRELENAIERAVVLLTGEYISERELPLAIAATPIK--EIQPLVDVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.788 to 1ny5B SCOP code=c.23.1.1	TM-score=0.726 to 1ny5B SCOP code=c.23.1.1	TM-score=0.718 to 1ny5B SCOP code=c.23.1.1	TM-score=0.646 to 1ny5B SCOP code=c.23.1.1	TM-score=0.624 to 1ny5B SCOP code=c.23.1.1