Template-based Modeling Results for PQIA_ECOLI

Submitted Primary Sequence

>Length 417
MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAWDAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTFFLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFVKLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIRQGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIMVTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHGKRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIMTMFSAMTFDPRLSWDRQPESEHEES
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAWDAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTFFLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFVKLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIRQGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIMVTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHGKRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIMTMFSAMTFDPRLSWDRQPESEHEES
CCCCCCCCCCEECCCCCCEEECCCCCCCCEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAWDAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTFFLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFVKLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIRQGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIMVTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHGKRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIMTMFSAMTFDPRLSWDRQPESEHEES
524332223100012010001114233222010120101012123212210000000000000000000000020111201010020000002231100000000001000000000000001313122212200020011022000010000000000011121010000000000000000001012000121002001312323322322211232112001001011223322012021301233321220000000000000001110100001121232311001000101221110000000000000000100000000000313132213102100100100010000000000000000312100101001000000000000000111000200023223244444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAWDAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTFFLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFVKLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIRQGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIMVTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHGKRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIMTMFSAMTFDPRLSWDRQPESEHEES
1	PROSPECT2	1xm9A	0.107	0.851	1.806	threading_1	YLSSQDEKYQAIG--AYYIQHTCFQDESAKQQVYQLGGKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNG-----IREAVSLLRRTGNAEIQKQLTGLELIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLSSADALIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPEE----------------------------------------ETNPKGSGWLYHSDAIRTYLNLMGK-----------SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARL----LQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQKQYFSSSSKELQGVL
2	PPA-I	1is2A2	0.054	0.842	1.206	threading_2	------------------------------------------MNTFNPELITHILDGSPENTRRRREIENLILNDPDFQKL-----TYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQSEPQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIPNIYVTFTPACTFEGENTVMMLQTARFLMKIYDQVRSGKLVGGMVSY-LNDLPSVDINSLEGLTEAYKLRAARLVE------------------IAAKNLQTHVSHRKSKEVAWNLTSVDLVRASEAHCHYVVVKVFKLPKIQDKAVQAVLRNLCLLYSLYGISQKGGDFLEGSIITGAQLSQVNARILELLTLIRPNAVALVDAFDFKDMTLGSVLGRYDGNV
3	HHPRED-g	2waq_P	0.190	0.101	1.048	threading_3	------------CGKCWKTFTDEQLKVLPGVRCPYCGYKIFMVRKPTIKIVKAI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	SAM-T99	1ivsA3	0.238	0.302	1.041	threading_4	GLAYRAPRLVNWCPRCETTLSDLEVE----ATCSRCGTPIE---------------------------------------------------------YAIFPQWWLRMRPLAEELKGLRRGDIAFVPERWKKVNMDWLENVKDWN--------------------------------------------ISRQLWWGHQIPA------------------WYCEDCQAVVPRPERSCEACGSPRLKRD------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	PROSPECT2	1jdha	0.105	0.959	1.768	threading_5	VNLINDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQRTMQNTNDVETARCTAGTLHNLLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNEGAKMAVRLAGGLQKMVALLITTDCLQILAYGNLASGGPQALVNIMRTYTYEKLLW-TTSRVLKVLSV---------CSSNKPAIVEAGGMQALGLHLTQNCLWTLRNLSDAATKQEGMGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGRAGDREDITEPAICALRHAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRALCPANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRIPLFVQLLYSPI-------ENIQRVAAGVLCELAIEAEGATAPLTELLHSRNEGMS
6	PPA-I	3g61A1	0.056	0.808	1.144	threading_6	------------------------------------VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMF--FQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPN-------------------IEAFANARGAAYEVFKIIDNKPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQA-------MMYFSYAACFRFGAYLVTQQLMT----------------
7	PROSPECT2	1ejlI	0.093	0.902	1.740	threading_7	INSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGG------AIPAFISLLASPHAHISEQAVWA-----LGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLL--HHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPS---------LLTNPKTNIQKEATWTMSNAGRQDQIQQVVNHGLVPFLVGVLS------------KADFKTQKEAAWAITNYTSGGTVEQIVIEPLMNLLSAKD-------TKIIQVILDAISNIFQAAEKLLDKIEALQRHENESFS
8	PPA-I	2ooeA	0.067	0.854	1.100	threading_8	---------------------------------------MAEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVM-KGLDRNAPSVPPQPQEAQQVDMWKKYIQWEKSN--------PLRTEDQTLITKRVMFAYE---QCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISLKKNMLLYFAYADYEESRMK----------YEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAE
9	PROSPECT2	3a6pA1	0.099	0.942	1.703	threading_9	AMDQVNALTVMMDPNSTEFKEKCPI-------CVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNGMSRLEKVYL----KNSVMELIANGTLNILEEENHIKDA------LSRIVVEMIKREWPQHWPDMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGY-------IDWVSMSHITAENCKLLEILCLLLNECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQTADGLVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTHPSQFLRTQMTWGALFRHEILSRDPLLLAIIPKYLRASMTNLVKMGFSPSCEYSRFDFDSDEDF
10	PPA-I	3a6pA1	0.092	0.882	1.075	threading_10	-------------------------------------AVMMDPNSTQRYRLEALKFCEEFKEKCPICVPCGLRLAEKTQVAIVRHFGLQILEHVVYLKNSVMELIANGNHIKDALSRIVVEMIKREWPQHWPDMLIELDTLSKQETQTELVMFILLRLAEDVVTFQTLPPQQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKL-EDRKPLMVLFGDVAMHYILSAAQTGGLVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTPSQFLRSSTQMTWGALFRHEILSR---DPLLLAIIPKYLRASMTNLV--------KMGFPSKTDS

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.887 to 1xm9A SCOP code=a.118.1.24	TM-score=0.772 to 1xm9A SCOP code=a.118.1.24	TM-score=0.783 to 1is2A SCOP code=a.29.3.2	TM-score=0.280 to 2d5bA SCOP code=a.27.1.1	TM-score=0.374 to 2d5bA SCOP code=a.27.1.1