Template-based Modeling Results for PPPA_ECOLI

Submitted Primary Sequence

>Length 269
MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLALPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGSTTLPFGPCLSLGGIATLYLQALF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLALPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGSTTLPFGPCLSLGGIATLYLQALF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLALPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGSTTLPFGPCLSLGGIATLYLQALF
21120021110000000000000000000000110120022100212232222324100001202012032202022000000000120202104230111000000000000000001111101000000000000000000012120110000000000000001121211010000000000000000100000013230001000000000000000000000000000000000002332322001000000000000013223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLALPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGSTTLPFGPCLSLGGIATLYLQALF
1	PROSPECT2	3a0oA3	0.070	0.952	1.531	threading_1	GWAEFYEKWRQMYIDCQEVIYAIRHLAIAGRVLGRDDLLDASRKWLLAVAAWD--------TKGATSRAYNDEAGFRVVVALAWGYD-----WLYDHLSERRTVRSVLLERTREVADHVIAPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSPWAGTDGGWAEGPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTGLKLGYNVRQFAGVTHYQWYFDHIKADATGTEMAFYNYLNFDDLVYRHDY
2	HHPRED-l	3s0x_A	0.197	0.491	2.478	threading_2	--------------------------------------------------------------------------------------------------------------------------SGS-IEYIIGALGLIIASVQD----EIEDYIWIFLAVFGVLFAIYSSITLLDYSILINSISGFVICFILGY-----FLSG-IGGGDGK-LIGLGALTSLGTFPI-VFINGFF-VFLLILNGAENPQIPLIIPITLSYLVTPIIGDR-
3	HHPRED-g	3s0x_A	0.194	0.498	3.851	threading_3	--------------------------------------------------------------------------------------------------------------------------SGS-IEYIIGALGLIIASVQD----EIEDYIWIFLAVFGVLFAIYSSITLLDYSILINSISGFVICFILGY-----FLSG-IGGGDGK-LIGLGALTSLGVFINGIFF-VFLPFVILILEQKNETQIPLIIPITLSYLVTPIIGDRI
4	PROSPECT2	1ezfa	0.056	0.922	1.454	threading_4	NSLKTCYKYGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPD------WRFMESKEKDRQVLEDFPTISLEFR--------NLAEKYQTVIADICRRMGIGMAEFLDKHVDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHH-------IPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNGAVKIDATNMPAVKAIIYQYMEEIY
5	PROSPECT2	2bkuB2	0.095	0.974	1.376	threading_5	LTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYTFSPYLLKALN-------QVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAEDPQLYTSRAAVGLIGDIAAMFPDGSIKYGQDWVIDYIKRTRSGQLF
6	PROSPECT2	3hfwA	0.096	0.933	1.374	threading_6	MIHRQLAQLGGLVMHLATAEALVLTQLYYLLAKHYQDCMEDASVHNAMQLKPGKPNGWRIPFNSHEGGCGA----AMRAMCIGLRFPH--------------HSQLDTLIQVSIESGRMTHHHPTGYLGALASALFTAYAVNSRPPLQWGKGLMELLPEAKKYIVQSGYFVEENLQHWSYFQTKWENYLRDQFYTSLSYSGWGGSSGHDAPMIAYDAVLSWKELAHRASTAAIAGCWWGVMYGFKGEKLEYRNRLETARALYSLGSKSL
7	PROSPECT2	3g9dA	0.113	0.918	1.355	threading_7	SIRS---------RALGAYLGLACGDALGATVEFLTKGEIAHQ--------YGVHKHIKGGGWLKLPAGQVTDDTEMSIHLGRAILAAPEWVWLKGVPVDVGDTTRRGIRRFIMHGTLSEPESEYHAMRNLPVALAFERWTVEQAHITHCNAMSDAATLTLGHMVRRLVLGGDVRDVRDESNKLIAIVDTMQTVMHYYFQTD-----SVESCVVETVNQGGDADTTGAIAGMLAGATYGVETIPPRRKLDRDVYNEICAQVDGLLARAL
8	MUSTER	3zuxA	0.140	0.903	0.823	threading_8	IISSFIGKTFSLWAALFAAAAFFAGPYIPWLLG-FGMGLTLKP-SDFDILFKHPKVVIIGV-----------IAQFAIMPATAWCLSKGCCARGNVALSVAVTSVSTLTSPLLTPAIFLMLAQAAGMLMSIVKMVLLPIVLGLIVHKVLGSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLP------YDAQKALTIEVGMQNSGLAAALAAAHF-------AAPVVAVPGALFSVWHNISGSLLATYW
9	SPARKS	2xwub	0.153	0.922	0.988	threading_9	GLIGLIPRISISNVQLADTVMFTIGALSEWLA-DHPVMINSVLPLVLHALGNPELSVSSVSTKKICRECKYDLPAANIVAVSQDVLMKQ--------IHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIPN--PSNKLAIVHILGLLSNLFTTLDISHPN------PVVVVLQQVFQLIQKVLSKWL---NDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTI-PQASALDLTRQLVHIFAHEP
10	PROSPECT2	1jdha	0.079	0.985	1.341	threading_10	AIVRTMQNVDSVLFYAITTLHNLLLHLVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKLHLTDPSQSDAATKQEGMEGLLGTLVQLLGSDDINLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLEMAQNAVRLHYGLPVVVKPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN----IQRVAAGVLCELAQDKEA

Predicted Tertiary Structure


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TM-score=0.435 to 1h2sB SCOP code=f.17.4.1	TM-score=0.619 to 1hzfA SCOP code=a.102.4.4	TM-score=0.421 to 1nlxN SCOP code=a.24.17.1	TM-score=0.418 to 1nlxN SCOP code=a.24.17.1	TM-score=0.737 to 1t5jA SCOP code=a.209.1.1