Template-based Modeling Results for PPDB_ECOLI

Submitted Primary Sequence

>Length 187
MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRKLALEDEIWLRVFTVAKHLQRAGYCHGICTGEGLEIVGQGDCVIVQWDANSNGIWDREPVKESDQIGFRLKEHVLETLRGATSCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVLTVNMRAASKSEPQTVVNASYSVTGFNL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRKLALEDEIWLRVFTVAKHLQRAGYCHGICTGEGLEIVGQGDCVIVQWDANSNGIWDREPVKESDQIGFRLKEHVLETLRGATSCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVLTVNMRAASKSEPQTVVNASYSVTGFNL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEECCCCCEECCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCHHHCCCCCEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRKLALEDEIWLRVFTVAKHLQRAGYCHGICTGEGLEIVGQGDCVIVQWDANSNGIWDREPVKESDQIGFRLKEHVLETLRGATSCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVLTVNMRAASKSEPQTVVNASYSVTGFNL
5434341111000000000000000000300120132012013211112102210110031023001121202030020214100000000031300122332322220001023210101211210213001301332101021020211223321100000021224322211010111020344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRKLALEDEIWLRVFTVAKHLQRAGYCHGICTGEGLEIVGQGDCVIVQWDANSNGIWDREPVKESDQIGFRLKEHVLETLRGATSCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVLTVNMRAASKSEPQTVVNASYSVTGFNL
1	MUSTER	3cfiB	0.153	0.733	1.093	threading_1	--------------------------------------ELSQERTARLNELQRALVMMDSDFRQIALRQTRTNGKLLHWASDNKGIMFARL-NPQQ---QFPRGEVTKVGYRIKDERLERVWWRYPDTPAGQEGVVTPLLSDVEELNVRFYDGKQWIN--------EWSNELTLPAAISVELTLKDY
2	SPARKS	3cfib	0.140	0.727	0.978	threading_2	--------------------------------------ELSQERTARLNELQRALVMMDSDFRQIALRQTRTNGKLLHWADSDNKGIMFARLGWHNPQQQFPRGEVTKVGYRIKDERLERVWWRYPDTPAG-----QEGVVTVEELNVRFYDGKQWIN--------EWSNELTLPAAISVELTLKDY
3	PROSPECT2	3by9A	0.046	0.936	1.038	threading_3	RFQYQALLNEHQSQLDRFSSHIIPHLISK-----DKELVDALLSAQNSAQIDITNRYLEQVNEVIQAAD-------TYLIDRFGNTIASSNWNLDRSFIGRGWQNKSSYFVATDDHQVWLFHSVADLSPAQLNDIRQSQQYLDSPIPSLGWQGDLQAEQSEWRKPEKHWLQDDYIVSSRPRVLSPKI
4	PPA-I	1oqwA	0.153	0.770	1.084	threading_4	-------FTLIELMIVVAIIGILAAIAIPQYQNYVARSEGASALASVNPLKTTVEEALSRGWSVKSGTGTEDATKKEVPLGVAA------DANKLGTIALKPDPADGT-----ADITLTFTMGGAGPKNKG------------KIITLTRTAADG---LWKCTSDQDEQFIPKGCSR----------
5	HHPRED-l	3nje_A	0.078	0.690	2.005	threading_5	-----------------------------------------RVQEQRMRELVRAMGALERDLTQAVERPVRELGGAFLSEENDQIVEFTRGGW------------LQRVRWSLSGETLERRYWLVLDRAQDSKPRVQQVLDGVTALSWRWQGHWPTPLAVEMTLE--HRHYGKLVRVWRLLDPP---
6	HHPRED-g	2ret_B	0.142	0.717	4.059	threading_6	--------------------------------------ELSQERTARLNELQRALV--DSDFRQIALRQTRT---KLLLDSDNKGI-FARL-----GWHNPPRGEVTKVGYRIKDERLERVWWRYPDTP--QEGVVTPLLSDVEELNVRFYDGKQWINEWSISVELTLKDYGKIARTYLT--PEGNL
7	SP3	1ykda	0.100	0.963	0.503	threading_7	ERIDNQGFTDEQLFQEFAPSIRLILESSRSFYIATQKQRAAAAMMKAVKSLSQSSLDLEDTLKRV-------MDEAKELMNADRSTLWLIDRDRHELWTKITQDNGSTKELRVPIGVAASGQKYDHPDSATAKQIDQQNGYRTCSLLCMPVFNGDQELIGVTQLVNKKKTGEFPPYNPETWPIAPEC
8	SAM-T99	3cfiB	0.162	0.727	4.211	threading_8	--------------------------------------ELSQERTARLNELQRALVMMDSDFRQITRTNGES--KKLLHWAD-----YLLDSDNKGIWHNPPRGEVTKVGYRIKDERLERVWWRYPDTPAGQEGVVTPLLSDVEELNVRFYDGKQWINEWSISVELTLKDYGKIARTYLTP------
9	MUSTER	3njeA	0.058	0.743	1.001	threading_9	-----------------------------------------RVQEQRMRELVRAMGALERDLTQAVERPVRDELGDNRGA-------FLSEGENDQIVEFTRGGWLQRVRWSLSGETLERRYWLVLDRAQDSKPRVQQVLDGVTALSWRFLDKEHWQGHWPTDEGSEEERLESLPLAVEMTLEHRHY
10	SPARKS	3njea	0.102	0.684	0.751	threading_10	-----------------------------------------RVQEQRMRELVRAMGALERDLTQAVERPVRDELGAFLSEGENDQIVEFTRGGW-----------LQRVRWSLSGETLERRYWLVLDRAQDVQQVLDG----VTALSWRFLDKEHHWPTDEGSEEERLESLPL---AVEMTLEHRHY

Predicted Tertiary Structure


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TM-score=0.654 to 3ci0J SCOP code=d.24.1.5	TM-score=0.637 to 3ci0J SCOP code=d.24.1.5	TM-score=0.624 to 3ci0J SCOP code=d.24.1.5	TM-score=0.408 to 2p7jB SCOP code=d.110.6.2	TM-score=0.818 to 1oqwA SCOP code=d.24.1.1