Template-based Modeling Results for POTB_ECOLI

Submitted Primary Sequence

>Length 275
MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASRLLNKKVELE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASRLLNKKVELE
CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASRLLNKKVELE
54012101100000000010000000123322002000002000200111002000100000000000000000000000021333131001000000000000000000100012301001002100013220300101000000000000000000000003501320120042120120100020001001100000000000000010000100101211100100111002111121000000000000000000012002123332434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASRLLNKKVELE
1	MUSTER	2onkC	0.180	0.887	2.552	threading_1	LLALLSSIILLFVLLPVAATVTLQL------------FNFDEFLKAASPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFS--------PLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAY-YPMIAPTLIYERYLSE-GLSAAMPVAAILILLSLAVFVALRIIVG---------
2	SPARKS	2onkc	0.164	0.909	5.982	threading_2	RLLFSALLALLSSIILLFVLLPVAATVTLQL------FNFDEFLKAADPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFS--------PLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAY-YPMIAPTLIYERYLSE-GLSAAMPVAAILILLSLAVFVALRIIVG---------
3	PROSPECT2	2onkC	0.179	0.913	2.953	threading_3	MRLLFSALLALLSSIILLFVLLPVAATVTLQL-----FNFDEFLKAADPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFS--------PLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPM-IAPTLIYERYLSE-GLSAAMPVAAILILLSLAVFVALRIIV---------G
4	PPA-I	2onkC	0.180	0.887	5.829	threading_4	LLALLSSIILLFVLLPVAATVTLQ------------LFNFDEFLKAASPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFS--------PLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAY-YPMIAPTLIYERYLSE-GLSAAMPVAAILILLSLAVFVALRIIVG---------
5	HHPRED-l	2onk_C	0.177	0.884	6.437	threading_5	LALLSSI-ILLFVLLPVAATVTLQ------------LFNFDEFLKAADPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFS---PL-----KFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIA-YYPMIAPTLIYER-YLSEGLSAAMPVAAILILLSLAVFVALRIIVG---------
6	HHPRED-g	2onk_C	0.177	0.884	5.655	threading_6	LALLSSI-ILLFVLLPVAATVTLQ------------LFNFDEFLKAADPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFS---PL-----KFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYP-MIAPTLIYER-YLSEGLSAAMPVAAILILLSLAVFVALRIIVG---------
7	SP3	3d31c	0.193	0.884	5.046	threading_7	VFSFLLLVLFLFIFLTLSNMIFEQI-----------TEDFSGLVKAANRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGSRGLIGEPL------ESYIQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAY-YPMVGPTLIYDRFIS-YGLSASRPIAVLLILVTLSIFLVI-R------------
8	SAM-T99	2onkC	0.174	0.898	3.842	threading_8	---------FSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAADPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSF--------SPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAY--YPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG---------
9	MUSTER	3d31C	0.176	0.891	2.430	threading_9	LTFVFSFLLLVLFLFIFLTLSNMIFEQ--------ITEDFSGLVKAA-RSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGSRGLIGEPL------ESYIQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAY-YPMVGPTLIYDRFISY-GLSASRPIAVLLILVTLSIFLVIR-------------
10	SPARKS	3d31c	0.189	0.884	5.807	threading_10	VFSFLLLVLFLFIFLTLSNMIFEQ-----------ITEDFSGLVKAANRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGSRGLIGEPL------ESYIQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAY-YPMVGPTLIYDRFIS-YGLSASRPIAVLLILVTLSIFLVIR-------------

Predicted Tertiary Structure


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TM-score=0.840 to 2onkC SCOP code=f.58.1.1	TM-score=0.840 to 2onkC SCOP code=f.58.1.1	TM-score=0.921 to 2onkC SCOP code=f.58.1.1	TM-score=0.876 to 2onkC SCOP code=f.58.1.1	TM-score=0.842 to 2onkC SCOP code=f.58.1.1