Template-based Modeling Results for POTA_ECOLI

Submitted Primary Sequence

>Length 378
MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGRECNIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELENGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGRECNIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELENGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK
CCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEECCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHCCCCCEEEEEEEEECCCCEEEEECCCEEEEEECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEEEEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGRECNIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELENGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK
543333234333222200101101100322100230002024010000001121010000000000221330200022110130112232001001000001101001000000213412122012102200410203202322132012121110000110133120000110011002301420121032003502000000011232002101100001202011111132013212110001001200002010022234210101131120202132214322201000101102012333444220010102100020210100010351210000111233233132223220000013310000233448
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGRECNIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELENGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK
1	MUSTER	1z47A	0.387	0.910	3.847	threading_1	-------------GSMTIEFVGVEKIYGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQ----NGRIEVA--GAALPV--DPAVSEGSEVAVVVRPKDVELQPASERE----AHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHR---WSPGAWVHMNVTR--WFIFPR----
2	SPARKS	1z47a	0.390	0.910	5.491	threading_2	-------------GSMTIEFVGVEKIYGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAV---QNG---RIEVAGAALPV--DPAVSEGSEVAVVVRPKDVELQPASERE----AHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHR---WSPGAWVHMNV--TRWFIFPR----
3	PROSPECT2	2yyzA	0.377	0.934	6.079	threading_3	---------------PSIRVVNLKKYFGKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPPKYREVGMVFQNYALYPHMTVFENIAFPLRARRISKDEVEKRVVEIARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFIGNTNFLRDFSVSVENK-QTILKRDDVIIKLPEPVD-VKLKEVVVGIRPEHCRISRERVENS---IPGVVYVVEPLGRDIIVNVKTEKGEIIKVF-----GDTGKAPQPGENVFLVPDLRKIHLFNPETEE
4	PPA-I	1z47A	0.387	0.910	5.074	threading_4	-------------GSMTIEFVGVEKIYGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQ----NGRIEVAG----AALPVDPAVSEGSEVAVVVRPKDVELQPASEREAH----AQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHR---WSPGAWVHMNVT--RWFIFPR----
5	HHPRED-l	2it1_A	0.408	0.921	3.148	threading_5	-------------MV-EIKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVTELPPKDRNVGLVFQNWALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAKMLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFLGNMNFVEAKVEDG----KLVI-TEKSKLPIPKQYKETGITEVIIGFRPHDAEIVKGE----GEGIVGEVYSFEPLGREQIVTVSVNDSI-VKVFAP-----EGEHFSFGEKVTIKVKEELLVLFDKKTE-
6	HHPRED-g	2it1_A	0.407	0.929	2.843	threading_6	--------------MVEIKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVTELPPKDRNVGLVFQNWALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAKMLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFLGNMNFVEAKVE---DGKLVITEKSKLPIPKQYVVKETGITEVIIGFRPHDAEIVKGE----GEGIVGEVYSFEPLGREQIVTVSVND-SIVKVFAPE-----GEHFSFGEKVTIKVKEELLVLFDKKTEK
7	SP3	1z47a	0.384	0.910	5.410	threading_7	-------------GSMTIEFVGVEKIYGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAV----QNGRIEVAG----AALPVDPAVSEGSEVAVVVRPKDVELQPASERE----AHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPS-----ADRHRWSPGAWVHMNVTRWFIFPR----
8	SAM-T99	1z47A	0.387	0.910	3.597	threading_8	-------------GSMTIEFVGVEKIYGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQNGR--------IEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPAS----EREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPS---ADRHRWSPGAWVHMNVTRWFIFPR------
9	MUSTER	3d31A	0.352	0.918	3.790	threading_9	----------------MIEIESLSRKWKN-FSLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPEKHDIAFVYQNYSLFPHMNVKKNLEFGMRMKKIKD---PKRVLDTARDLKIEHLLDRNPLTLSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQTEARIMADRIAVVMDGKLIQVGKPEEIFEKPVEGRVASFVGFENVLKGRVISAEQG-LLRIRVGEVVIDAA--GDMEVGDQVYAFLRPENIALSKSSTQSSINSLQGRVTEAWVLGALVRVKVDC--GVPLNVLITR-RSAEEMELSPGVQIYARFKASSVHVLR-----
10	SPARKS	3d31a	0.349	0.918	5.399	threading_10	----------------MIEIESLSRKWKNF-SLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPEKHDIAFVYQNYSLFPHMNVKKNLEFGMRMKKIK---DPKRVLDTARDLKIEHLLDRNPLTLSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQTEARIMADRIAVVMDGKLIQVGKPEEIFEKPVEGRVASFVGFENVLKGRVISAEQGLLRIRVGE---VVIDAAGDMEVGDQVYAFLRPENIALSKSSTQSSINSLQGRVTEAWVLGALVRVKVDCGVPLNVLIT---RRSAEEMELSPGVQIYARFKASSVHVLR-----

Predicted Tertiary Structure


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TM-score=0.812 to 1oxtA SCOP code=b.40.6.3	TM-score=0.954 to 3d31A SCOP code=b.40.6.3	TM-score=0.805 to 1oxtA SCOP code=b.40.6.3	TM-score=0.877 to 1vciA SCOP code=b.40.6.3	TM-score=0.803 to 1oxtA SCOP code=b.40.6.3