Template-based Modeling Results for PNCA_ECOLI

Submitted Primary Sequence

>Length 213
MPPRALLLVDLQNDFCAGGALAVPEGDSTVDVANRLIDWCQSRGEAVIASQDWHPANHGSFASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLHQKAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFTVLDALQLGYKVNVITDGCRGVNIQPQDSAHAFMEMSAAGATLYTLADWEETQG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPPRALLLVDLQNDFCAGGALAVPEGDSTVDVANRLIDWCQSRGEAVIASQDWHPANHGSFASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLHQKAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFTVLDALQLGYKVNVITDGCRGVNIQPQDSAHAFMEMSAAGATLYTLADWEETQG
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHCHHHCCCCCCEEEECCCCCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPPRALLLVDLQNDFCAGGALAVPEGDSTVDVANRLIDWCQSRGEAVIASQDWHPANHGSFASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLHQKAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFTVLDALQLGYKVNVITDGCRGVNIQPQDSAHAFMEMSAAGATLYTLADWEETQG
551200000002101012010103302100300230021034310000000011123200112121232222132312232211210022130020032023322100012132222210001122133231101200332402100000000000010001101422010000210021122222200200110131102002122123235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPPRALLLVDLQNDFCAGGALAVPEGDSTVDVANRLIDWCQSRGEAVIASQDWHPANHGSFASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLHQKAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFTVLDALQLGYKVNVITDGCRGVNIQPQDSAHAFMEMSAAGATLYTLADWEETQG
1	MUSTER	2wtaA	0.372	0.972	3.351	threading_1	MQNSALVVVDVQNGFTPGGNLAVADADTIIPTINQLAGCFE----NVVLTQDWHPDNHISFAANHGKQPFETIELDYGSQVLWPKHCIQGTHDAEFHPDLNIPTAQLIIRKGFHAHIDSYSAFMEADHTTMTGLTGYLKERGIDTVYVVGIATDFCVAWTALDAVKQGFKTLVIEDACKGIDLNG-SLEQAWQTMQQQGVVRIQSTDLLNEC-
2	SPARKS	3r2ja	0.361	0.897	4.062	threading_2	STTDVLIIADMQVDFLPGGSLHVKGGEALLDGINAVSSQL--PFRYQVATQDWHPENHCSFVTHGG---------------PWPPHCVQGSAGAQLHAGLHTQRINAVIRKGVTQQADSYSAFVEDNG-VSTGLAGLLHSIGARRVFVCGVAYDFCVFFTAMDARKNGFSVVLLEDLTAAVDDAA--WSARTAELKDAGVVLLKSSALVAE--
3	PROSPECT2	2wt9A	0.377	0.958	3.907	threading_3	KQNSALVVVDVQNGFTPGGNLAVADADTIIPTINQLAG----CFENVVLTQDWHPDNHISFAANHGKQPFETIELDYGSQVLWPKHCIQGTHDAEFHPDLNIPTAQLIIRKGFHAHIDSYSAFMEADHTTMTGLTGYLKERGIDTVYVVGIATDFCVAWTALDAVKQGFKTLVIEDACKGIDLNG-SLEQAWQTMQQQGVVRIQSTDL----L
4	PPA-I	2wtaA	0.367	0.972	3.677	threading_4	PQNSALVVVDVQNGFTPGGNLAVADADTIIPTINQLAGCF----ENVVLTQDWHPDNHISFAANHPKQPFETIELDYGSQVLWPKHCIQGTHDAEFHPDLNIPTAQLIIRKGFHAHIDSYSAFMEADHTTMTGLTGYLKERGIDTVYVVGIATDFCVAWTALDAVKQGFKTLVIEDACKGIDLNG-SLEQAWQTMQQQGVVRIQSTDLLNEC-
5	HHPRED-l	2wt9_A	0.373	0.958	3.137	threading_5	PQNSALVVVDVQNGFTPGGNLAVADADTIIPTINQLAGC----FENVVLTQDWHPDNHISFAANHPKQPFETIELDYGSQVLWPKHCIQGTHDAEFHPDLNIPTAQLIIRKGFHAHIDSYSAFMEADHTTMTGLTGYLKERGIDTVYVVGIATDFCVAWTALDAVKQGFKTLVIEDACKGIDL-NGSLEQAWQTMQQQGVVRIQSTDLL----
6	HHPRED-g	2wt9_A	0.377	0.958	3.446	threading_6	PQNSALVVVDVQNGFTPGGNLAVADADTIIPTINQLAGC----FENVVLTQDWHPDNHISFAANHGKQPFETIELDYGSQVLWPKHCIQGTHDAEFHPDLNIPTAQLIIRKGFHAHIDSYSAFMEADHTTMTGLTGYLKERGIDTVYVVGIATDFCVAWTALDAVKQGFKTLVIEDACKGIDL-NGSLEQAWQTMQQQGVVRIQSTDLL----
7	SP3	3r2ja	0.363	0.892	4.244	threading_7	VSTDVLIIADMQVDFLPGGSLHVKGGEALLDGINAVSSQL--PFRYQVATQDWHPENHCSFVTHGG---------------PWPPHCVQGSAGAQLHAGLHTQRINAVIRKGVTQQADSYSAFVED-NGVSTGLAGLLHSIGARRVFVCGVAYDFCVFFTAMDARKNGFSVVLLEDLTAAVDDAA--WSARTAELKDAGVVLLKSSAL---VA
8	SAM-T99	2wtaA	0.367	0.972	4.675	threading_8	PQNSALVVVDVQNGFTPGGNLAVADADTIIPTINQLAG----CFENVVLTQDWHPDNHISFANHPGKQPFETIELDYGSQVLWPKHCIQGTHDAEFHPDLNIPTAQLIIRKGFHAHIDSYSAFMEADHTTMTGLTGYLKERGIDTVYVVGIATDFCVAWTALDAVKQGFKTLVIEDACKGIDLNGS-LEQAWQTMQQQGVVRIQSTDLLNEC-
9	MUSTER	3r2jA	0.361	0.897	3.107	threading_9	LTTDVLIIADMQVDFLPGGSLHVKGGEALLDGINAVSSQL--PFRYQVATQDWHPENHCSFVTHGG---------------PWPPHCVQGSAGAQLHAGLHTQRINAVIRKGVTQQADSYSAFVEDNG-VSTGLAGLLHSIGARRVFVCGVAYDFCVFFTAMDARKNGFSVVLLEDLTAAVDDAA--WSARTAELKDAGVVLLKSSALVAE--
10	SPARKS	3pl1a	0.368	0.869	3.761	threading_10	MR--ALIIVDVQNDFCEGGSLAVTGGAALARAISDYLAEAA-DYHHVVATKDFHIDPGDHFSGTPDY------------SSSWPPHCVSGTPGADFHPSLDTSAIEAVFYKGAY--TGAYSGF-EGVDENGTPLLNWLRQRGVDEVDVVGIATDHCVRQTAEDAVRNGLATRVLVDLTAGVSA--DTTVAALEEMRTASVELVCS--------

Predicted Tertiary Structure


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TM-score=0.862 to 1im5A SCOP code=c.33.1.3	TM-score=0.855 to 1im5A SCOP code=c.33.1.3	TM-score=0.873 to 1im5A SCOP code=c.33.1.3	TM-score=0.859 to 1im5A SCOP code=c.33.1.3	TM-score=0.866 to 1im5A SCOP code=c.33.1.3