Template-based Modeling Results for PLSX_ECOLI

Submitted Primary Sequence

>Length 356
MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNSDAITPLLAKADFEQRSRLQIIPAQSVIASDARPSQAIRASRGSSMRVALELVKEGRAQACVSAGNTGALMGLAKLLLKPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQFAIMGSVLAEEVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEANELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKSLTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAARLESVYPAGFELLDGGKSGTLR
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNSDAITPLLAKADFEQRSRLQIIPAQSVIASDARPSQAIRASRGSSMRVALELVKEGRAQACVSAGNTGALMGLAKLLLKPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQFAIMGSVLAEEVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEANELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKSLTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAARLESVYPAGFELLDGGKSGTLR
CCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNSDAITPLLAKADFEQRSRLQIIPAQSVIASDARPSQAIRASRGSSMRVALELVKEGRAQACVSAGNTGALMGLAKLLLKPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQFAIMGSVLAEEVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEANELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKSLTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAARLESVYPAGFELLDGGKSGTLR
55300000001102100110010002003312301000002131013003413233422010010322122222002103223200110002003323020000001100000001100320321310000000123441200000000113020110010010000001201413202000001133314123102200200321220101010202201213000000101101000200200021002102220322131001100021013001310230123212100000030000201110214000100210020033202220121022013101322322422324
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNSDAITPLLAKADFEQRSRLQIIPAQSVIASDARPSQAIRASRGSSMRVALELVKEGRAQACVSAGNTGALMGLAKLLLKPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQFAIMGSVLAEEVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEANELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKSLTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAARLESVYPAGFELLDGGKSGTLR
1	MUSTER	1vi1A	0.354	0.882	2.477	threading_1	--SLRIAVD-AGGDHAPKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLTTT----SDRITVLHADEVIEPTDEPVRAVRRKKNSSV--LAQEVAENRADACISAGNTGALTAGLFI-VGRIKGIDRPALAPTLPTVSGDGFLLLDVGANVDAKPEHLVQYAIGSVYSQQVR-GVTSPRVGLLNVGTEDKKGNELTKQTFQILKETANINFIGNVEARDLLDDVADVVVTDGFTGNVTLKTLEGSALSIFK----DVTSTLVL-------------KPKLKEKKEYSNYGGASLFGLKAPVIKAHGSSDSNAVFRAIRQAREVSQ-NVAALIQEEVKEEKTDE-------------
2	SPARKS	1vi1a	0.365	0.885	6.952	threading_2	--SLRIAVD-AGGDHAPKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLT----TTSDRITVLHADEVIEPTDEPVRAVRRKKNSSV--LAQEVAENRADACISAGNTGALT-AGLFIVGRIKGIDRPALAPTLPTVSGDGFLLLDVGANVDAKPEHLVQYA-IGSVYSQQVRGVTSPRVGLLNVGTEDKKGNELTKQTFQILKETANINFIGNVEARDLLDDVADVVVTDGFTGNVTLKTLEGSALSIF---KRDVTSTLVL-------------KPKLKEKKEYSNYGGASLFGLKAPVIKAHGSSDSNAVFRAIRQAREVSQ-NVAALIQEEVKEEKTDE-------------
3	PROSPECT2	1u7nA	0.367	0.857	3.496	threading_3	----KIAVD-AGGDNAPQAIVEGVL-AKQDFPDIEFQLYGKEAEIKK-----YITDEKNITIIHTDEKIASDDEPVKAIRRKKTASV-LAAQAVKNGEADAIFSAGNTGALLAAGLFIVGRIKNVERPGLSTLPVG-EPDKGFDLDLGANADNKPEHLVQYAVLGSFYAEKVRNVQNPRVGLLNNG----TGSELTKKAFELLAADETINFVGNVEARELLNGVADVVVTDGFTGNAVLKSIEGTANSL---LKTAILSG-----------ALLLKNALHGKDEDYSKHGGAVLFGLKAPVIKTHGATGPDAVRYTIRQIHTLETQVVPQLVEY--------------------YE
4	PPA-I	1u7nA	0.370	0.857	3.480	threading_4	----KIAVD-AGGDNAPQAIVEGVLAKQDF-PDIEFQLYGKEAEIKKYI-----TDEKNITIIHTDEKIASDDEPVKAIRRKKTAS-VLAAQAVKNGEADAIFSAGNTGALLAAGLFIVGRIKNVERPGLSTLPVG-EPDKGFDLDLGANADNKPEHLVQYAVLGSFYAEKVRNVQNPRVGLLNNG----TGSELTKKAFELLAADETINFVGNVEARELLNGVADVVVTDGFTGNAVLKSIEGTAN---SLLKTAILSGALLLKNALHGK-----------DEDYSKHGGAVLFGLKAPVIKTHGATGPDAVRYTIRQIHTLE-TQVVPQLVEYYE-------------------
5	HHPRED-l	1vi1_A	0.375	0.876	7.800	threading_5	-S-LRIAVDA-GGDHAPKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLTT----TSDRITVLHADEVIEPTDEPVRAVRRKKNSS----AQEVAENRADACISAGNTGAL-TAGLFIVGRIKGIDRPALAPTLPTVSGDGFLLLDVGANVDAKPEHLVQYAI-GSVYSQQVRGVTSPRVGLLNVGTEDKKGNELTKQTFQILKETANINFIGNVEARDLLDDVADVVVTDGFTGNVTLKTLEGSALSIFK--RDV-TSTL-------V---LKPKLKE-K---EYSNYGGASLFGLKAPVIKAHGSSDSNAVFRAIRQARE-VSQNVAALIQEEVKEEKTDE-------------
6	HHPRED-g	1u7n_A	0.385	0.846	7.721	threading_6	----KIAVDA-GGDNAPQAIVEGV-LAKQDFPDIEFQLYGKEAEIKKYITD-----EKNITIIHTDEKIASDDEPVKAIRRKKTAS-VLAAQAVKNGEADAIFSAGNTGALLAAGLFIVGRIKNVERPGL-STLPV-GDKGFD-LDLGANADNKPEHLVQYAVLGSFYAEKVRNVQNPRVGLLNNGT----GSELTKKAFELLAADETINFVGNVEARELLNGVADVVVTDGFTGNAVLKSIEGTA----SLLKTAIL-------GALL---LKNALHG-KDE-DYSKHGGAVLFGLKAPVIKTHGATGPDAVRYTIRQIHT-LETQVVPQLVEYYE-------------------
7	SP3	1vi1a	0.371	0.885	6.935	threading_7	--SLRIAVD-AGGDHAPKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLTTTS----DRITVLHADEVIEPTDEPVRAVRRKKNSSV--LAQEVAENRADACISAGNTGALT-AGLFIVGRIKGIDRPALAPTLPTVSGDGFLLLDVGANVDAKPEHLVQYA-IGSVYSQQVRGVTSPRVGLLNVGTEDKKGNELTKQTFQILKETANINFIGNVEARDLLDDVADVVVTDGFTGNVTLKTLEGSALSIF---KRDVTSTL----------VLKPKLK---EKKEYSNYGGASLFGLKAPVIKAHGSSDSNAVFRAIRQAREVSQ-NVAALIQEEVKEEKTDE-------------
8	SAM-T99	1vi1A	0.368	0.871	7.710	threading_8	--SLRIAVDA-GGDHAPKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLTTTS----DRITVLHADEVIEPTDEPVRAVRRKKNSSVL--AQEVAENRADACISAGNTGA-LTAGLFIVGRIKGIDRPALAPTLPTVSGDGFLLLDVGANVDAKPEHLVQYAI-GSVYSQQVRGVTSPRVGLLNVGTEDKKGNELTKQTFQILKETANINFIGNVEARDLLDDVADVVVTDGFTGNVTLKTLEGSALSIF----------------KRDVTSTLVLKPKLKEKKEYSNYGGASLFGLKAPVIKAHGSSDSNAVFRAIRQARE-VSQNVAALIQEEVKE------------------
9	MUSTER	1u7nA	0.374	0.857	2.461	threading_9	----KIAVD-AGGDNAPQAIVEGVLAKQDF-PDIEFQLYGKEAEIKKYI-----TDEKNITIIHTDEKIASDDEPVKAIRRKKTAS-VLAAQAVKNGEADAIFSAGNTGALLAAGLFIVGRIKNVERPGLSTLPVG-EPDKGFDLDLGANADNKPEHLVQYAVLGSFYAEKVRNVQNPRVGLLNNG----TGSELTKKAFELLAADETINFVGNVEARELLNGVADVVVTDGFTGNAVLKSIEGTAN---SLLKTAILS---------GALLLKNALHG--KDEDYSKHGGAVLFGLKAPVIKTHGATGPDAVRYTIRQIHTLET-QVVPQLVEYYE-------------------
10	SPARKS	1vmia	0.174	0.775	2.821	threading_10	RAPARVVF-PDALD---QRVLKAAQYLHQQ-GLATPILVANPFELRQFALSHGVA--DGLQVIDPHGNLAREEFAHRWLARAGEKTPPDALEKLTDGKADVCIALSSTANVLRAGLRIIGLQPGCKTLSSIFLLPQYSGPALGFADCSVVPQPTAAQLADIALASAETWRAITGEE-PRVALSSNGSARHPCVANVQQATEIVREAPKLVVDGELQFDAAFQGKANVVFPSLEAGNIGYKIAQRLG--------------------------------------GYRAV-GPLIQGLAAPHDLSRGCS-VQEIIELALVAA--VPR------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.918 to 1vi1A SCOP code=c.77.1.4	TM-score=0.916 to 1vi1A SCOP code=c.77.1.4	TM-score=0.928 to 1vi1A SCOP code=c.77.1.4	TM-score=0.899 to 1u7nA SCOP code=c.77.1.4	TM-score=0.884 to 1u7nA SCOP code=c.77.1.4