Template-based Modeling Results for PLSC_ECOLI

Submitted Primary Sequence

>Length 245
MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPTDAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAEREAAGKV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPTDAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAEREAAGKV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEHHHHHHCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPTDAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAEREAAGKV
22100000000000000000000000012312300100010001001000020202223303331000000101010000000100322000000300120100000020010000013212301110120022035431000000201215232112012000100120201000000001232132332320101010021021332233103200210220023102201331233333344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPTDAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAEREAAGKV
1	MUSTER	1k30A2	0.145	0.898	0.953	threading_1	---------------------SSHHKAIREPFDYYIFGQNYIRPLIDF---NSFVGNLSLFKQGHNVVLISNHQTEADPAIISLLLEKTTIFVAGDRVLADPLCKPFSIGRNLICVYSKKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRTGEWYPFDDNMRRLIQHSDVPLFPLALLCHDIMPPPSIAFNG-AGLSVAPEISFEKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQSTADV
2	SPARKS	1k30a	0.122	1.000	1.498	threading_2	EIVLSNMTVALDRILLDVEDPFVFSSHHKAIREPFDYYIFGQNYIRPLIDFGSFVGNLSLFQQGHNVVLISNHQTEADPAIISLLLEKNTIFVAGDRVLADPLCKPFSIGRNLICVYSKKKRKANTRSLKEMALLLRGGQLIWIAPSGGRDRTGEWYPAPDNMRRLIQHSDVPLFPLALLCHDIMPPPSVIAFNGAGLSVAPEISTHKNPEEVREAYSKALFDSVAMQYNVLKTKQGLGASTADV
3	PROSPECT2	1k30a	0.131	1.000	2.258	threading_3	LLSCIKKVAAGMEELYQNYRNAVIESGNPKADEIVLYYIFGQNYIRPLIDFGSFVGNLSLLQQGHNVVLISNHQTEADPAIISLLLEKTTIFVAGDRVLADPLCKPFSIGRNLICVYSKKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPPAPFDASSVRLIQHSDVPLFPLALLCHDIMPPPSVIAFNGAGLSVAPEISTHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGSQPW
4	PPA-I	1k30A2	0.126	0.906	1.372	threading_4	---------------------SSHHKAIREPFDYYIFGQNYIRPLIDFGNS--FVGNLSLFKDGHNVVLISNHQTEADPAIISLLLEKTTIFVAGDRVLADPLCKPFSIGRNLICVYSKKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDSTGEWYPAPDNMRRLIQHSDVPLFPLALLCHDIMPPPSVIAFNGAGLSVAPEISTHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLGAS
5	HHPRED-l	1iuq_A	0.150	0.955	7.091	threading_5	EELYQEIVLSN-TVALDRILLDVEDPFSSREPFDYYIFGQNY--IRPLIDFNSFVGNLSLFQQGHNVVLISNHQTEADPAIISLLLEKNTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHRKANTRSLKE-ALLLRGGQLIWIAPSGGRDRTGEWYSSVDN-RRLIQHSDVPLFPLALLCHDI-PP---IAFNGAGLSVAPEISFEEIAEEVREAYSKALFDSVA-QYNVLKTAISGKQGLGA-
6	HHPRED-g	1iuq_A	0.168	0.971	6.029	threading_6	YQNYRNAVIESVLSN-TVALDRILLVFSSREPFDYYIFGQNYIRLIDFGNSFVFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKNTIFVAGDRVLADPLCKPFSIGRNLICVYSKKRKANTRSLKE-ALLLRGGSQLIWIAPSGGRDRPGEWYPSVDN-RRLIQHSDVPLFPLALLCHDI-PP--RIAFNGAGLSVAPEISFEEIAAEEVEAYSKALFDSVA-QYNVLKTAISGKGLGAST
7	SP3	3duga	0.083	0.931	0.439	threading_7	ADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVRDAIERGVINGPTMLVSGPALGITGG---HCDHNLLPPEFNYSSEGVVDSPWEAMVRKNRKYGADLIFCATGGVMSRNTDVNAKQLEEMKAIVDEAHNHGMKVAAHAHG------------LIGIKAAIKAGVDSVEHASFIDDETIDM--AIKNNTVLSMDIFVSDYILGEGAKAGIREESLNKERLVGKKQRENFMNAHRRGII
8	SAM-T99	1k30A2	0.158	0.645	0.851	threading_8	----------------------------------------------------------EKLQQGHNVVLISNHQTEADPAIISLLLEKNTIFVAGDRVLADPLCKPFSIGRNLICVYSKKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPTGEWYPAPFDA-------------PPSQVEIEIRVIAFNGAGLSVAPEISFEEI--AATHKNPEEVREAYSKALFD--------------
9	MUSTER	1k30A	0.135	0.996	0.780	threading_9	DEIVLSNMTVALDRILLDVE-FVFSSHHKAIREPFDYYIFGQNYIRPLIDFGSFVGNLSLFKQGHNVVLISNHQTEADPAIISLLLEKTTIFVAGDRVLADPLCKPFSIGRNLICVYSKKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRTGEWYPFDDNMRRLIQHSDVPLFPLALLCHDIMPPPSVIAFNGAGLSVAPEISTHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQSTADV
10	SPARKS	1mejb	0.114	0.718	0.714	threading_10	--------------------------------------------------------------RILVAVLISGTGSNLQALIDSTREPNSDIVISNKA--AVAGLDKAERAIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVKWNGKAHEQALETGVTVTGCTVH-----FVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKI

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.803 to 1k30A SCOP code=c.112.1.1	TM-score=0.795 to 1k30A SCOP code=c.112.1.1	TM-score=0.808 to 1k30A SCOP code=c.112.1.1	TM-score=0.781 to 1k30A SCOP code=c.112.1.1	TM-score=0.809 to 1k30A SCOP code=c.112.1.1