Template-based Modeling Results for PA1_ECOLI


  Submitted Primary Sequence

>Length 289
MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCHHHEEEEEEEECCCEEEEEEEEEECCCCCCCCCHHHHCCEEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCHHCCCCCCCEEEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF
4320100000000000101133232432432212212002201243331010000120000000011223311222322331432201010000010021111231000000001010111123311212223210100000102141111102000000001021322221201100001000111200000100000132231210130000010100020220000020011133120001000001024201000000001010001122222000000001113
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF
1MUSTER1im0A0.9960.9074.147threading_1---------------------------VHDAPAVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWARLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF
2SPARKS2hdfa0.1010.9620.928threading_2VDSIER--IEVVRGPSSLYGSDALGGITKKIGQKWSGTVTVDTTIQEHRDRGDTYNGQFFTSGPLIDGVLGKAYGSLAKREKDRIEGFSSRDGNVEFAWTP-NQNHDFTAGYGFDRQDRDSDDK--------NRLERQNYSVSHNGRWDYGTSELKYYGEKVENKNPSPITSESNTVDGKYTLPLTAINQFLTVGGERHDKSDAVSKTSASQYALFVEDEWRIFEPLALTTGVRETYGEHWSPRAYLVYNATDTVTVKGGWATAFKASLLQLSPDWTSNSCRGACKIVG
3PROSPECT21fw2A1.0000.8894.682threading_3--------------------------------AVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF
4PPA-I1im0A0.9960.90710.879threading_4---------------------------VHDAPAVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWARLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF
5HHPRED-l1qd5_A1.0000.88610.311threading_5--------------------------------AVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDL-
6HHPRED-g1qd5_A1.0000.8898.706threading_6--------------------------------AVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF
7SP32hdfa0.1000.9690.445threading_7IRGLDSSYTLILVKRVNSRNAVNWIPVTKKIGQKWSGTVTVDTTIQEHRDRGDTYNGQFFTSGPLID-GVLGKAYGSLAKREKDRIEGFSSRDGNVEFAWTPNQNHDFTAGYGFDRQD--------RDSDDKNRLERQNYSVSHNGRWDYGTSELKYYGEKVENKNPSPITSESNTVDGKYTLPLTAINQFLTVGGERHDKSDAVSKTSASQYALFVEDEWRIFELALTTGVRDDHETEHWSPRAYLVYNATDTVTVKGGWATAFAPSLLQLSPDWTSNSCRGACKIVG
8SAM-T991im0A0.9960.90711.394threading_8---------------------------VHDAPAVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWARLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF
9MUSTER1w8nA10.1030.9410.731threading_9TP---DLLASYDGRPTGIGAPTDGGRTWGEQQVVSAGQTTAPIKGFSDPSYLVDRETIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSSHRTITADITPDPGWRSRFAASGEGIQLRYGP---------HAGRLIQQYT----IINAAGAFQAVSVYSDDHGRTGEAVGVGMDENKTVELSDGRVLLNSRDYRKVAVSTDGRDLPDPTNNASIIRAFPSARAKVLLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQPGYGTYGLLYEPGTGIRYANFNL-AWL
10SPARKS1nqea0.1150.9650.808threading_10SKDYNYATLDEMKQYTVQWANNVIVGHGSIGAGVDWQKQTTTPGTGYVEDGYDQRNTGIYLTGLQQVGDFTFEGAARSDDNSQF---GRHGTWQTSAGWEF-IEGYRFIASYGTSYKAPNLG-QLYGFYGNPNLDPEKSKQWEGAFEGLTAGVNWRISGYRNDVSDLIDYDDHTLKYVEATANFDTGPLTHTVSYDYVDARNAITLRRAKQ--QVKYQLDWQLYDFDWGITYQYLGTGGVSLWDLAVAYPVTSHLTVRGKIANDYETV-YGYQTAGREYTLSGSYTF--

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.952 to 1im0A
TM-score=0.999 to native
SCOP code=f.4.2.1		 TM-score=0.952 to 1im0A
TM-score=0.999 to native
SCOP code=f.4.2.1		 TM-score=0.550 to 1kmpA
TM-score=0.433 to native
SCOP code=f.4.3.3		 TM-score=0.932 to 1im0A
TM-score=0.978 to native
SCOP code=f.4.2.1		 TM-score=0.952 to 1im0A
TM-score=0.999 to native
SCOP code=f.4.2.1

  Experimental Structure

Download 1im0A
SCOP code=f.4.2.1