Template-based Modeling Results for PITB_ECOLI

Submitted Primary Sequence

>Length 499
MLNLFVGLDIYTGLLLLLALAFVLFYEAINGFHDTANAVAAVIYTRAMQPQLAVVMAAFFNFFGVLLGGLSVAYAIVHMLPTDLLLNMGSTHGLAMVFSMLLAAIIWNLGTWFFGLPASSSHTLIGAIIGIGLTNALLTGSSVMDALNLREVTKIFSSLIVSPIVGLVIAGGLIFLLRRYWSGTKKRDRIHRIPEDRKKKKGKRKPPFWTRIALIVSAAGVAFSHGANDGQKGIGLVMLVLVGIAPAGFVVNMNASGYEITRTRDAVTNFEHYLQQHPELPQKLIAMEPPLPAASTDGTQVTEFHCHPANTFDAIARVKTMLPGNMESYEPLSVSQRSQLRRIMLCISDTSAKLAKLPGVSKEDQNLLKKLRSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVAMTIGEKIGKRGMTYAQGMAAQMTAAVSIGLASYIGMPVSTTHVLSSAVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAIFLSGGLYWIALQLI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLNLFVGLDIYTGLLLLLALAFVLFYEAINGFHDTANAVAAVIYTRAMQPQLAVVMAAFFNFFGVLLGGLSVAYAIVHMLPTDLLLNMGSTHGLAMVFSMLLAAIIWNLGTWFFGLPASSSHTLIGAIIGIGLTNALLTGSSVMDALNLREVTKIFSSLIVSPIVGLVIAGGLIFLLRRYWSGTKKRDRIHRIPEDRKKKKGKRKPPFWTRIALIVSAAGVAFSHGANDGQKGIGLVMLVLVGIAPAGFVVNMNASGYEITRTRDAVTNFEHYLQQHPELPQKLIAMEPPLPAASTDGTQVTEFHCHPANTFDAIARVKTMLPGNMESYEPLSVSQRSQLRRIMLCISDTSAKLAKLPGVSKEDQNLLKKLRSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVAMTIGEKIGKRGMTYAQGMAAQMTAAVSIGLASYIGMPVSTTHVLSSAVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAIFLSGGLYWIALQLI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLNLFVGLDIYTGLLLLLALAFVLFYEAINGFHDTANAVAAVIYTRAMQPQLAVVMAAFFNFFGVLLGGLSVAYAIVHMLPTDLLLNMGSTHGLAMVFSMLLAAIIWNLGTWFFGLPASSSHTLIGAIIGIGLTNALLTGSSVMDALNLREVTKIFSSLIVSPIVGLVIAGGLIFLLRRYWSGTKKRDRIHRIPEDRKKKKGKRKPPFWTRIALIVSAAGVAFSHGANDGQKGIGLVMLVLVGIAPAGFVVNMNASGYEITRTRDAVTNFEHYLQQHPELPQKLIAMEPPLPAASTDGTQVTEFHCHPANTFDAIARVKTMLPGNMESYEPLSVSQRSQLRRIMLCISDTSAKLAKLPGVSKEDQNLLKKLRSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVAMTIGEKIGKRGMTYAQGMAAQMTAAVSIGLASYIGMPVSTTHVLSSAVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAIFLSGGLYWIALQLI
4522120121000000000000000010010010001000100013002010000000002000000000100110131012320132212000000000000000000002111020110000000000000010111012103012023002000100011000100000001002111222343332231132333332444121101001000000000110031013000000000000000001122312121022021001102300221131024113232213212231231221202122002001201210223032132012211220130010002002101412211331121022011201112320010000000000000000002300110023002320220100001000000000011020110011000100000000222111120000000000000000000000001001311
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLNLFVGLDIYTGLLLLLALAFVLFYEAINGFHDTANAVAAVIYTRAMQPQLAVVMAAFFNFFGVLLGGLSVAYAIVHMLPTDLLLNMGSTHGLAMVFSMLLAAIIWNLGTWFFGLPASSSHTLIGAIIGIGLTNALLTGSSVMDALNLREVTKIFSSLIVSPIVGLVIAGGLIFLLRRYWSGTKKRDRIHRIPEDRKKKKGKRKPPFWTRIALIVSAAGVAFSHGANDGQKGIGLVMLVLVGIAPAGFVVNMNASGYEITRTRDAVTNFEHYLQQHPELPQKLIAMEPPLPAASTDGTQVTEFHCHPANTFDAIARVKTMLPGNMESYEPLSVSQRSQLRRIMLCISDTSAKLAKLPGVSKEDQNLLKKLRSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVAMTIGEKIGKRGMTYAQGMAAQMTAAVSIGLASYIGMPVSTTHVLSSAVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAIFLSGGLYWIALQLI
1	PROSPECT2	1qgra	0.052	1.000	2.031	threading_1	MLHTLGTETYRPSSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGDENDDDDDWNPCKAAGVCLMLLATCCHIKNPDWRYRDAAVTVGRICELLPEAAINDVYLAPLLQCLIEGASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFSGGVQEDALMAVSTLVLAAVGLVGDLCRALQSNINENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVRVEFILSFIDHIAG
2	PROSPECT2	1b3ua	0.105	0.976	1.967	threading_2	LIDELRNEDVQLRLNSIKKLLLPFLTDTIYDEDEVLLALAEQLGTFTGPEYVHCLLPPLESLAVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLAASKLGEFAKVLELDNVKSEIIPMFSNLASDE--QDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAV--GPEITKTDLVPAFQNLMSHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHKDECPEVRLNIISNLDCVNEVI-GIRQLSQSLLPAIVELALAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHV---YAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCG--QDITTKHMLPTVLRMAGDPVANVRFNVAK--SLQKIGPILDNSTLQSEVKPILEKLT
3	PROSPECT2	1jdha	0.075	0.886	1.963	threading_3	VHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTY-------------------------EKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPS--QRLVQNCLWTLRNLSDAATKQEGMEGLLGTLV--------QLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQ--------VGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQE--------AEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCEL------AQDKEAAEAIEAEGATAPLTELLVATYAAAVLFRMS
4	PROSPECT2	1gw5b	0.067	0.964	1.943	threading_4	LKAELNNEKKEKRKEAVKKVIA--AMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDC------EDPNPLIRALAVRTMGTEYLCEPLRKCLKDEDPYVRKTAAVCVAKL-------HDINAQMVEDQGFLDSLRDLIADSNPM-VVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLPEVQYVALRNINLIVQKRPEILKQEIKVFFVK--YNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSIEPTLLDELICLASVYHKPPNAFV
5	PROSPECT2	1w63A	0.069	0.962	1.892	threading_5	MPAPIRLRELIRTIRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHS---TQFVQGLALCTLGCMMCRDLAGEVEKLLKTSNSYLRKKAALCAVHLMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVR------ILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVAT--------NTETSKNVGNAILYETVLTSGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQVQVAAWCIGEYGDLLVPIQVTEDEVLDILES--VLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYG
6	MUSTER	3dh4A	0.114	0.900	0.866	threading_6	LP--------------WWAVGASLIAANISA--EQFIGMSGSGYSIGL----AIASYEWMSAITLIIVGKYFLPIFIEKIYTIPFVEKNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILMYSILGLALFALVYSIVVWTDVIQ--VFFLVLGGFMTTYMAVSFIGGGWFAGVSKMVDAAPGHFEMILD----QSNPQYMNLPGIAVLIGGLWVANLYYW-GFN--Q---YIIQRTLVSEAQKGIVFAAFL-KLIVPFLVVLPGIAAYVITSDPQLMASLGDIAATNLPSAA---------NADKAYPWLTQFLPVGVKGVV--AAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIAPMLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKK-----TTSKGAIIGVVASIPFALFLKMPFQMLYTLLFTMVVIAFTSINDDDPKGIS-MFVTDSFNIAAYGIMIVLAVLYTLFWV
7	SPARKS	2xwub	0.080	0.980	0.820	threading_7	QITRFASGSKIVLTRLCVALASLALSMMPDAWPCAVADMVRLFQAPVDGQGRCLALLELLTVLPEEFQTSRLPQYRKGLVRTSLAVECGAVFPLLEQLLSCVRQKVLKCFSSWLEVPLQDCEALIQAAFAFDSSVEAIVNAISQLVLGLQEQLRQAVQMETSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMPGHYPVNETTSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDVLLHKAFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELSIAETIDVNYSDVGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGNPELSVSSVSTLYDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSA-LQVEEILKNLHSLISPYEEIPNPSNKLAIVHILGLLSNLFTTLDISHPNPVVVVL---------QQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLL
8	PROSPECT2	1qsaa	0.087	0.964	1.889	threading_8	MMPGLKDYPLYPYLEYRQITDLQSRFVNELARREDWRGLLAFSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKSRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLANNPNTVLTFARTTGA---TDFTRQMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVT---DEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQAEAKEILHQLMPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVDNTARSEWANLVKSKSKTEQAQLARYAFNNQWWDLSVQATIAGKLWDHLEERAYNDLFKRYTSGKEIPQSYAMAIARQESASGLMQIMPGTATHTVKMFSIPGYSSPGQLNINIGTSYLQYVYQQFGNNRIFSSAAYNA------------GPGRVRTWLVAFVESIPFSETRGYVKNVLAYDAY
9	PPA-I	1b3uA	0.094	0.960	0.913	threading_9	SIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDL-----EAHFVPLVKRLAGFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSD--------DTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAED-KSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKVSDANQHVKSALASVIMGLSPILGKDNTIEAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAK----WRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVL--AMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAG
10	HHPRED-l	1u7g_A	0.107	0.711	0.203	threading_10	------AADKADNAF--ICTALVLF-T----------------------------------IPGIALF---YGGLIRG--------KNVLS-LTQVTVTFALVCILWV-------------------VYGYSLASGEGNNF--FGNINWL-LKNIEIYQYIHVAFQGSFACITVGLIVGALAERIRFPAVLIFVVVWLTLSY-IPIAH-VWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLI------GKRVGFGKAFKPHNLP-VF-------TGTAILYIGWFGFNAGS-----------AGTANEIAALAFVNTVVATAAAILGWIFEWALRGLPSLLGACGAIAGLVGVTPAC------------------GYIGVGGALIIGVVAGL--AGLWGVT-LKLLR--V----DDPCDVFGVHGVCGIVGCI-TGFAAS---------SLGGVGFAE-GVT-GHQLLVQLESIAITIVWSGVVAFIGYKLADLT-

Predicted Tertiary Structure


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TM-score=0.836 to 1b3uA SCOP code=a.118.1.2	TM-score=0.670 to 1qgkA SCOP code=a.118.1.1	TM-score=0.588 to 2q6hA SCOP code=f.54.1.1	TM-score=0.850 to 1b3uA SCOP code=a.118.1.2	TM-score=0.843 to 2ooeA SCOP code=a.118.8.7