Template-based Modeling Results for PITA_ECOLI

Submitted Primary Sequence

>Length 499
MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLLAAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLIVSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQHPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSLDQRSQMRRIMLCVSDTIDKVVKMPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLLAAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLIVSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQHPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSLDQRSQMRRIMLCVSDTIDKVVKMPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLLAAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLIVSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQHPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSLDQRSQMRRIMLCVSDTIDKVVKMPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL
5522121111000000000000000000000010001000000103102020000000001000000000100110131012321232221100000000000000000002111020010000000000000010111012001001012001000100011000100000000002211211332021211222233332444221101001000000000110031013000000000000000000112312121022022001101200221021033112233212133212220121202122002002201110122132234112211210120100002002202412202231131022022211221320010000000000000000002300110023002321120200001000000000011120110011000000000000222111120000000000000000000000001001211
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLLAAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLIVSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQHPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSLDQRSQMRRIMLCVSDTIDKVVKMPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL
1	SPARKS	2xwub	0.132	0.958	1.002	threading_1	SWQLLQPKVPEIQYFGASALHIKISRYWSDQYESLKAQLFTQITR--FASGSKIVLTRLCVALASLALSM-MPDAWPCAVADMVRLFQAPVDGQGRCLALLELLTVLPEEFQTSRLPQYRKGLVRTSLAVCGAVFPLLEQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAALQDSELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQGDMETSHGICRIAVALGEN-HSRALLDQVEHWQSFLALVNMIMFCTGISSLTLTFWYTLQ--DDILSFEAEKQAVYQQVY------RPVYFQLVDVLLHKAQFYGFWSSDEKEQFRIYRVDISDTLMYVYEMLG-AELLSNLYDKLGRLLTSYS------WQHTEALLYGFQSIAETSDVVPGLIGLI--PRISISNVQLADTVMFTIGALSEWLADPVMINSVLPLVLHALGNPELSVSSVSTLKKICRKYDLPPYAANIVAVSQDVLMKQIH
2	PROSPECT2	1qgra	0.080	1.000	2.039	threading_2	MLHTLGTETYRPSSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMLQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGDENDDDDDWNPCKAAGVCLMLLATCCLEGPEPSQRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGASNVCWAFSSLAEAAYEAADVADDQEEPELIVQKLLETTDRPQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCSDVVMASLLRMFSGGVQEDMAVSTLVEVLGGEKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIPRVEFILSFIDHIAG
3	PPA-I	1b3uA	0.110	0.912	1.008	threading_3	FTTLVGGPEYVHCLLPPLESLAT------VEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSD------------DTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASD--EQDSVRLLAVEACVNIAQLL---PQEDLEALVMPTLRQAAED---KSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQ-----HVKSALASVIMGLSPILGKDNTIEHLLPL-------FLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAK----WRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLA--MSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAG
4	PROSPECT2	1jdha	0.092	0.920	2.034	threading_4	LTKLLNDEDQVVVNKAAVMVHQLSSRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLGLLAIFKSGGIPALVKML------GSPVDSVLFYAITTLHNLLAKMAVRLAGGLQKNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQ---RLVQNCLWTLRNLSDAATKQEGMEGLLGTLV--------QLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQ--------VGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQE--------AEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALC-------PANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIVATYAAAVLFRMS
5	PROSPECT2	1b3ua	0.103	0.976	2.014	threading_5	AAADGDDSLYPIAVLIRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYFRNLCSDDTPMVRRAAASKLGEFADNVKSEIIPMFSNLAAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAV--GPEITKTDLVPAFQNLMSHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVD------HVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCG--QDITTKHMLPTVLRMAGDPVANVRFNVAK--SLQKIGPILDNSTLQSEVKPILEKLT
6	PROSPECT2	1w63A	0.093	0.966	1.892	threading_6	MPAPILGYPAHFGQLECLRIGYLGAMLLLDERQDVHLLMTNCIKNHSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQ-------PLVQVAAWCIG----------EYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGRAVEYNALFKKYDHMRSALLE
7	PROSPECT2	2bkuB	0.076	1.000	1.888	threading_7	MLKKLSNDNFLQFAGLSSQVLILAALTLKNELVVKTQQFAQRWITQVSPEAKNQIKTNALTALAAQLIAAIADIELPHGAWPENTGAEQPENVKRASLLALGYMCILIAIVQGAQSTETSKAVRLAALNALAVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEVSMSAGACLQLFAQNCGNHILMDGPDKVQRTYYVHQALPSILNLMNDQSLQVDSVAESIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNFYPAFNARASAFSALTTMVEYATISTFVMDKLGQTMSVDENQLTLAQSLQELQSNILTVLAAVIRKDMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFNARRELKPAVLSVFGDIASNNGTLEALDYQIKVLEAVLDAYVGIVYVGTIFQFIAQVAL
8	MUSTER	1b3uA	0.109	0.958	0.829	threading_8	SIKKLSTIALALGVERTRSELLPFLTDTIYDLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATV----TVVRDKAVESLRAHEHSPSDLEAHFVPLVKRLAGFTSRTSACGLFSVCYQYFRNLCSPMVRRAAASKLGEFAKVLEL-VKSEIIPMFSNLASDDSVRLLAVEACVNIAQLL-PQEDLEALV--MPTLRQAAEDK---SWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKAEVRAAASHKCRENVIMSQILPCIKELVSDNQHVKSALASVIMGLSPILGKDNTIEHLLPL-DECPEVRLNIISNLDCVNEVIGILPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI-AATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPN------YLHRMTTLFCINVLSEVCGQDITTKHMLPTVL--MAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQ
9	SPARKS	2x1gf	0.101	0.956	0.871	threading_9	WQLMQLGKSQEVQFFGAITLHSKLMKHWHENREELKQKILESIVRAGGPKIVLNRLCISLGAYIVHMLGEEVINTFQNQRSQVIHTSVKRVVLRAEIVQLVIHTVERYLKLQMNRVWDAEAYSNMNRAVKCVGTWIKNIGYTIEGCVTITAVLLEVVHKCYWPCIHGCMTADENELAESCLK---TMVNIIIQPDCHNYPK--TAFVLIKMFLDSLSEITKTEWKRENDNEDIIVHIYMLFVSSVER--------HSTLLLSGITADPELSILVHRIVQEILHCTDKPGIYPVEESCSTMALAFWYMWEYIKPLYAHLTRILVRKSKSLAKWSSDDLECFRCYRQDISDTFMYCYDVLN-DYILEILAAMLDEAIADLQRHPTHW-TKLEACIYSFQS-VAEHRQIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMYIPPAINLLVRGL----NSSMSAQATLGLKELCRD--CQLQLKPYADPLLNACHASLN
10	PROSPECT2	3a6pA1	0.067	0.898	1.882	threading_10	------AMDQVNALCEQLVKAVTVMMKFCEEFKEKCPICVPCGLEKTQVAIVRHFGLQILE---------HVVKFRWNGMSRLE--------------KVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHWPDM----LIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQT-----ADGGGLVEKHYVFLKRLCQVLCALGNQL-------------CALLGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILSRDPLLLAIIPKYLRASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQQGEVMRLACRLKTSFQMAGEWLF

Predicted Tertiary Structure


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TM-score=0.591 to 2q6hA SCOP code=f.54.1.1	TM-score=0.576 to 1m8xA SCOP code=a.118.1.8	TM-score=0.640 to 1qgkA SCOP code=a.118.1.1	TM-score=0.775 to 1b3uA SCOP code=a.118.1.2	TM-score=0.844 to 1b3uA SCOP code=a.118.1.2