Template-based Modeling Results for PINR_ECOLI

Submitted Primary Sequence

>Length 196
MSRIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSRIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
CCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSRIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
5321000000042322231012102311031322100212112322223130022003303311100001012110202101300220251202010022211112120020002000000211231012113210210231333212332133311210121142311021004204011200120124234344
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSRIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
1	MUSTER	1gdtA	0.322	0.934	3.682	threading_1	M-RLFGYARVSTSQQSLDIQVRALKDAGV--KANRIFTDKASGSS--SDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
2	SPARKS	1gdta	0.317	0.934	3.781	threading_2	-MRLFGYARVSTSQQSLDIQVRALKDAGV--KANRIFTDKASGSS--SDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
3	PROSPECT2	2r0qC	0.320	0.908	3.295	threading_3	M--IIGYARVSSLDQNLERQLENLKTFGA----EKIFTEK--------NRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLGNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIK----HDNG
4	PPA-I	1gdtA	0.317	0.934	6.305	threading_4	-MRLFGYARVSTSQQSLDIQVRALKDAGV--KANRIFTDKASGSS--SDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
5	HHPRED-l	1gdt_A	0.317	0.934	4.151	threading_5	MR-LFGYARVSTSQQSLDIQVRALKDAG--VKANRIFTDKASGS--SSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRD---AVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
6	HHPRED-g	1gdt_A	0.313	0.929	3.824	threading_6	--MRFGYARVSTSQQSLDIQVRALKDAGVKA--NRIFTDKASGS--SSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDD-GISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRDA---VLNMWQQGLGASHISKTMNIARSTVYKVINESN----
7	SP3	1gdta	0.322	0.934	3.970	threading_7	M-RLFGYARVSTSQQSLDIQVRALKDAGVKA--NRIFTDKASGS--SSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
8	SAM-T99	1gdtA	0.317	0.934	4.808	threading_8	-MRLFGYARVSTSQQSLDIQVRALKDAGV--KANRIFTDKASGSS--SDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
9	MUSTER	2r0qC	0.309	0.908	3.132	threading_9	--MIIGYARVSSLDQNLERQLENLKTFGA----EKIFTEK--------NRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNLDKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG----
10	SPARKS	2r0qc	0.298	0.908	3.423	threading_10	--MIIGYARVSSLDQNLERQLENLKTFGAE----KIFT--------EKNRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.804 to 1gdtA SCOP code=a.4.1.2	TM-score=0.818 to 1gdtA SCOP code=a.4.1.2	TM-score=0.751 to 1gdtA SCOP code=a.4.1.2	TM-score=0.627 to 1gdtA SCOP code=a.4.1.2	TM-score=0.751 to 1gdtA SCOP code=a.4.1.2