Template-based Modeling Results for PINQ_ECOLI

Submitted Primary Sequence

>Length 196
MSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
CCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
5311000000042322231012102311031322100212112322223120022003303311100001012110202101300220252202010022211112120020002000000211231012113210210231333212332233311210121142311021004204011200120124234344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
1	MUSTER	1gdtA	0.322	0.934	3.676	threading_1	M-RLFGYARVSTSQQSLDIQVRALKDAGV--KANRIFTDKASGSS--SDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
2	SPARKS	1gdta	0.317	0.934	3.778	threading_2	-MRLFGYARVSTSQQSLDIQVRALKDAGV--KANRIFTDKASGSS--SDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
3	PROSPECT2	2r0qC	0.320	0.908	3.287	threading_3	M--IIGYARVSSLDQNLERQLENLKTFGA----EKIFTEK--------NRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLGNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIK----HDNG
4	PPA-I	1gdtA	0.317	0.934	6.166	threading_4	-MRLFGYARVSTSQQSLDIQVRALKDAGV--KANRIFTDKASGSS--SDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
5	HHPRED-l	1gdt_A	0.322	0.934	4.120	threading_5	MR-LFGYARVSTSQQSLDIQVRALKDAGVK--ANRIFTDKASGS--SSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRD---AVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
6	HHPRED-g	1gdt_A	0.313	0.929	3.842	threading_6	--MRFGYARVSTSQQSLDIQVRALKDAGVKA--NRIFTDKASGS--SSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDD-GISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRDA---VLNMWQQGLGASHISKTMNIARSTVYKVINESN----
7	SP3	1gdta	0.322	0.934	3.978	threading_7	M-RLFGYARVSTSQQSLDIQVRALKDAGVKA--NRIFTDKASGS--SSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
8	SAM-T99	1gdtA	0.315	0.923	4.778	threading_8	-MRLFGYARVSTSQQSLDIQVRALKDAGV--KANRIFTDKASGSSS--DRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINE------
9	MUSTER	2r0qC	0.309	0.908	3.117	threading_9	--MIIGYARVSSLDQNLERQLENLKTFGA----EKIFTEK--------NRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNLDKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG----
10	SPARKS	2r0qc	0.298	0.908	3.410	threading_10	--MIIGYARVSSLDQNLERQLENLKTFGAE----KIFT--------EKNRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.776 to 1gdtA SCOP code=a.4.1.2	TM-score=0.784 to 1gdtA SCOP code=a.4.1.2	TM-score=0.770 to 1gdtA SCOP code=a.4.1.2	TM-score=0.679 to 1gdtA SCOP code=a.4.1.2	TM-score=0.770 to 1gdtA SCOP code=a.4.1.2