Template-based Modeling Results for PHOB_ECOLI


  Submitted Primary Sequence

>Length 229
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFSTRF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFSTRF
CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEECCCEEEEECCEEEECCHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFSTRF
5522000121221012000100432111001021131002102422100000001012010020021035222243000000003123302010031101010011010300000011112222322232102021010013202011242202001210100100021232100021001200112021321000000220042135123320000011100102244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFSTRF
1MUSTER2oqrA0.3920.9693.736threading_1-ATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARS---SVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPNPVHLVTVRGLGYKLE---
2SPARKS1ys6a0.3770.9744.014threading_2-SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMD--NDVPVCVLSARVD--DRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ-
3PROSPECT21ys6A0.3770.9744.764threading_3-SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMD--NDVPVCVLSARVD--DRVAGLEAGADDYLVKPFVLAELVARVKALLRRSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ-
4PPA-I2oqrA0.3870.9694.060threading_4-ATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRA---RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPNPVHLVTVRGLGYKLE---
5HHPRED-l2gwr_A0.4190.9393.066threading_5-RQRILVVDDDASLAE-LTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDL-LPG-NGIDVCRVLRADS---GVPIV-LTAKTDTVDVVLGLESGADDYI-KPFKPKELVARVRARLRRNDDE-PAE-LSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYR--ADTRLVNVHVQRLRAKVEKDPNPTVVLTVRGVGYKAGPP-
6HHPRED-g1kgs_A0.3240.9172.543threading_6-NVRVLVVEDERDLADLITEALKKE-FTVDVCYDGEEG---ALNEPFDVVILDI-LPVHDGWEILKS-RESG--VNTPVL-LTALSDVEYRVKGLN-GADDYLPKPFDLRELIARVRALIRRKSES-KSTKLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLV-NKNRVVTKEELQEHLW-----VFSDVLRSHIKNLRKKVDKGFKKKIIHTVRGIGYVARDE-
7SP31ys6a0.3770.9743.817threading_7-SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMD--NDVPVCVLSARVD--DRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ-
8SAM-T992oqrA0.3870.9693.555threading_8-ATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRA---RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEDPANPVHLVTVRGLGYKLE---
9MUSTER1ys6B0.3730.9833.685threading_9-SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMD--NDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ-
10SPARKS3r0ja0.3330.9563.606threading_10PEARVLVVDDEANIVELLSVSLKFQGFEVYTATNGAQALDRARETRPDAVILDVPG---DGFGVLRRLRADGI--DAPALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRAGKNV---RLTFADIELDEETHEVWKAGQPVSLSPTEFTLLRYFVINAGTVLSKPKILDHVWRYDFGGDVNVVESYVSYLRRKIDT-GEKRLLHTLRGVGYVLREP-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.603 to 1ys6B
TM-score=0.619 to native
SCOP code=a.4.6.1
TM-score=0.607 to 1ys6B
TM-score=0.616 to native
SCOP code=a.4.6.1
TM-score=0.948 to 1ys6B
TM-score=0.862 to native
SCOP code=a.4.6.1
TM-score=0.948 to 1ys6B
TM-score=0.855 to native
SCOP code=a.4.6.1
TM-score=0.605 to 1ys6B
TM-score=0.621 to native
SCOP code=a.4.6.1

  Experimental Structure

Download 2iynB
SCOP code=c.23.1.1