Template-based Modeling Results for PHNN_ECOLI

Submitted Primary Sequence

>Length 185
MMGKLIWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASAGSENHIALSEQEFFTRAGQNLLALSWHANGLYYGVGVEIDLWLHAGFDVLVNGSRAHLPQARARYQSALLPVCLQVSPEILRQRLENRGRENASEINARLARAARYTPQDCHTLNNDGSLRQSVDTLLTLIHQKEKHHACL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMGKLIWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASAGSENHIALSEQEFFTRAGQNLLALSWHANGLYYGVGVEIDLWLHAGFDVLVNGSRAHLPQARARYQSALLPVCLQVSPEILRQRLENRGRENASEINARLARAARYTPQDCHTLNNDGSLRQSVDTLLTLIHQKEKHHACL
CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEECCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMGKLIWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASAGSENHIALSEQEFFTRAGQNLLALSWHANGLYYGVGVEIDLWLHAGFDVLVNGSRAHLPQARARYQSALLPVCLQVSPEILRQRLENRGRENASEINARLARAARYTPQDCHTLNNDGSLRQSVDTLLTLIHQKEKHHACL
55110000000111012000110133233200000100023223213110001231011102432001001011112101120120042110000100010022013313210000001011310231025244332220220012024223300000011120420031013002233433313
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMGKLIWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASAGSENHIALSEQEFFTRAGQNLLALSWHANGLYYGVGVEIDLWLHAGFDVLVNGSRAHLPQARARYQSALLPVCLQVSPEILRQRLENRGRENASEINARLARAARYTPQDCHTLNNDGSLRQSVDTLLTLIHQKEKHHACL
1	MUSTER	3tr0A	0.249	0.978	2.860	threading_1	NKANLFIISAPSGAGKTSLVRALVKA-LAEIKISISHTTRPKRPGDVDYFFIDETRFQA-VKEGAFLEHATIYERHYGTEDWVLRQLKAGRDVLLEIDWQGARQIRELFPPALSIFILPPSIEALRERLIKRRQDDTAIIEQRLALAREEAEFDYLVVNDN--FDQAVQNLIHIISAERLQRDVQ
2	SPARKS	1gky_	0.257	0.946	3.807	threading_2	--SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTASVKQVSKSGKTCILDIDMQGVKSVKAIPLNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAHDKVIVNDD--LDKAYKELKDFIFAEK------
3	PROSPECT2	2qorA	0.192	0.984	3.200	threading_3	ARIPPLVVCGPSGVGKGTLIKKVLSEFPSRFRFSISCTTRNKREKEVDYYFVDKDDFERKLKEGQFLEFDKYANNFYGTLKSYDLAVGEGKICLFE-NINGVKQLKESIQDGIYIFVKPPSIDILLGRLKNRNTEKPEEINKRQELTADKVGFNYFIVNDD--LARTYAELREYLLGSYPQLRGG
4	PPA-I	1lvgA	0.190	0.968	4.459	threading_4	---RPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEKDYYFVTREMMQRDIAAGDFIEHAEFSGNLYGTSEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQPPSLDVLEQRLRLRNTETEESLAKRLAAARTDGLFDLVIINDD--LDKAYATLKQALSEEIKKAQG-
5	HHPRED-l	1s96_A	0.260	0.957	2.071	threading_5	--GTLYIVSAPSGAGKSSLIQALLKTQPLDTQVSVSHTTRQPRPGEEHYFFVNHDEFKE-ISRDAFLEHAEVFGNYYGTSREAIQVLATGVDVFLDIDWQGAQQIRQK-PHARSIFILPPSKIELDRRLRGRGQDSEEVIAKR-AQAVAEAEYDYLIVND--DFDTALTDLKTIIRAERLRDAL-
6	HHPRED-g	1s96_A	0.264	0.962	3.075	threading_6	-QGTLYIVSAPSGAGKSSLIQALLKTQPLDTQVSVSHTTRQPRPGEVHYFFVNHDEFKE-ISRDAFLEHAEVFGNYYGTSREIEQVLATGVDVFLDIDWQGAQQIRQK-PHARSIFILPPSKIELDRRLRGRGQDSEEVIAKR-AQAVHYAEYDYLIVNDD--FDTALTDLKTIIRAERLR-SRQ
7	SP3	3lnca	0.199	0.870	4.056	threading_7	LVGVILVLSSPSGTVANKLLENIVK--------SVSVTTRAARKGEKDYYFVDREEFLRLCSNGEIIEHAEVFGNFYGVPRNLEDNVDKGVSTLLVIDWQGAFKFMEMMRHVVSIFIMPPSMEELRRR--------------RLKGAAFEIAYDYVIVNED--IEETADRISNILRAEQMKTCRQ
8	SAM-T99	1ex7A	0.246	0.946	3.625	threading_8	--SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVSVKQVSKSGKTCILDIDMQGVKSVKAIPENARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAHDKVIVNDDLDKAYKELKDFIFAEK--------
9	MUSTER	1s96A	0.244	0.973	2.756	threading_9	-QGTLYIVSAPSGAGKSSLIQALLKTQPLDTQVSVSHTTRQPRPGEVHYFFVNHDEFKE-ISRDAFLEHAEVFGNYYGTSEAIEQVLATGVDVFLDIDWQGAQQIRQK-PHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRAQAVAESHEYDYLIVNDD--FDTALTDLKTIIRAERLRSRQK
10	SPARKS	1s4qa	0.237	0.935	3.784	threading_10	-VGRVVVLSGPSAVGKSTVVRCLRERI-PNLHFSVSATTRAPRPGEVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHGTLQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAFDKVVVNRR--LESACAELVSLLVG--------

Predicted Tertiary Structure


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TM-score=0.848 to 1lvgA SCOP code=c.37.1.1	TM-score=0.935 to 1lvgA SCOP code=c.37.1.1	TM-score=0.922 to 1ex7A SCOP code=c.37.1.1	TM-score=0.883 to 1lvgA SCOP code=c.37.1.1	TM-score=0.942 to 1lvgA SCOP code=c.37.1.1