Template-based Modeling Results for PHNM_ECOLI

Submitted Primary Sequence

>Length 378
MIINNVKLVLENEVVSGSLEVQNGEIRAFAESQSRLPEAMDGEGGWLLPGLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVRDGGDRLENLEKMINAIEETQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLVSLMDHSPGQRQFANREKYREYYQGKYSLTDAQMQQYEEEQLALAARWSQPNRESIAALCRARKIALASHDDATHAHVAESHQLGSVIAEFPTTFEAAEASRKHGMNVLMGAPNIVRGGSHSGNVAASELAQLGLLDILSSDYYPASLLDAAFRVADDQSNRFTLPQAVKLVTKNPAQALNLQDRGVIGEGKRADLVLAHRKDNHIHIDHVWRQGKRVF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIINNVKLVLENEVVSGSLEVQNGEIRAFAESQSRLPEAMDGEGGWLLPGLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVRDGGDRLENLEKMINAIEETQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLVSLMDHSPGQRQFANREKYREYYQGKYSLTDAQMQQYEEEQLALAARWSQPNRESIAALCRARKIALASHDDATHAHVAESHQLGSVIAEFPTTFEAAEASRKHGMNVLMGAPNIVRGGSHSGNVAASELAQLGLLDILSSDYYPASLLDAAFRVADDQSNRFTLPQAVKLVTKNPAQALNLQDRGVIGEGKRADLVLAHRKDNHIHIDHVWRQGKRVF
CEEECEEEECCCCEEEEEEEEECCEEEEECCCCCCCCCEEECCCCEEECCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIINNVKLVLENEVVSGSLEVQNGEIRAFAESQSRLPEAMDGEGGWLLPGLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVRDGGDRLENLEKMINAIEETQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLVSLMDHSPGQRQFANREKYREYYQGKYSLTDAQMQQYEEEQLALAARWSQPNRESIAALCRARKIALASHDDATHAHVAESHQLGSVIAEFPTTFEAAEASRKHGMNVLMGAPNIVRGGSHSGNVAASELAQLGLLDILSSDYYPASLLDAAFRVADDQSNRFTLPQAVKLVTKNPAQALNLQDRGVIGEGKRADLVLAHRKDNHIHIDHVWRQGKRVF
210110200134200200000220101001323232321010400000000000001012211112241312121000000010111101000000001213321322310220020022024311110101000102112320021013002311210000121011211112231022112122111221022012210210231132113100100332500000111101110120241101002021012001002321100000011112121120110001003201000001110100010000100112133010220020002100200303231101402300000012333111011002312333
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIINNVKLVLENEVVSGSLEVQNGEIRAFAESQSRLPEAMDGEGGWLLPGLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVRDGGDRLENLEKMINAIEETQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLVSLMDHSPGQRQFANREKYREYYQGKYSLTDAQMQQYEEEQLALAARWSQPNRESIAALCRARKIALASHDDATHAHVAESHQLGSVIAEFPTTFEAAEASRKHGMNVLMGAPNIVRGGSHSGNVAASELAQLGLLDILSSDYYPASLLDAAFRVADDQSNRFTLPQAVKLVTKNPAQALNLQDRGVIGEGKRADLVLAHRKDNHIHIDHVWRQGKRVF
1	MUSTER	3hm7B	0.188	0.942	1.503	threading_1	LIIRSSTVVTETTTYRADVAIRNGIVSAITEPGSDDGPAIDGTGLHLFPGMVDVHVHFNEPGRTEWEG--------FASGSKSLAAGGVTTYFDMP--LNSNPPTITREELDKKRQLANEKS-----LVDYRFWGGL---VPGNIDHLQDLHDGGVIGFKAFMSECTDDFQFSHDETLLKGMKKIAALVHAESNEMVNALTTIAIEEQREAVERILRFAQLTCCPIHICHVSSLKRIKQAKGEGVNVSVETCLLFSLDEFAEIGYLAKCAPP--LR--ERQEVEDLWDGLMAGEIDLISSDHSPSLNTLAVMLTEGYHKRKMPLTQIVQLLSTEPAKRFGLPQKGTIQVGAEASFTLIDLNESYTKVKHTICQGKHVY
2	SPARKS	1nfga	0.167	0.952	2.947	threading_2	IIIKNGTIVTADGISRADLGIKDGKITQIGGALGPAERTIDAAGRYVFPGGIDVHTHVETVSFNTQSADT------FATATVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMA--------GGKSAIDYGYHIIVLDPTDSVIEELEVLPDLGITSFVFMAYRGMNMIDDVTLLKTLDKAVKTGSMVHAENGDAADYLRDKFVAEGKTATARALALAEIVNAPIYIVHVTCLEEVMRAKSRGVRALYLYLTKEDLERPDFEGAKYVFTPPARAK----KDHDVLWNALRNGVFETVSSDHCSWLEERLMMVYQGVNEGRISLTQFVELVATRPAKVFGMFPQGTIAVGSDADIVLWDPEAEMVVPKTVLLRGKVIV
3	PROSPECT2	1k6wa	0.150	0.915	3.112	threading_3	QTIINARLPGEEGLWQ--IHLQDGKISAISGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSVKQRAWQTLKWQIANGIQHVRTHVDVSDATL------TALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRRFVETVAALAHHEGMGARVTASHTTAMHSYNGAY----------TSRLFRLLKMSGINFVANPLVNIHL-------------QGRFDTYPKRRGITRVKEMLESGINVCFGHDDVFANMLQVLHMGLHVCQLMGQINDGLNLITHHSARTLNL-QDYGIAAGNSANLIILPAENRQVPVRYSVRGGKVIA
4	PPA-I	3ooqA	0.186	0.913	1.383	threading_4	ILFKNATVFPTSRPFKGDVLVSNGKVEKVGENIDPDAEIVDLTGKFLFPGFVDAHSHIGLFEEGVGYYYSLDGFNPQDPAIERALAGGVTSVIVPGSANPVGGQG-----------SVIKFRSIIVEECIVKDPAGLKAFGENPKRVYGERKQTPSTR--------------------GTAGVIRDYFTKVKNYKKKELAQKEGKEFTETDLKEVGEVLRKKIPARHAHDILTAIRIAEEFGFNLVIEHGTEAYKISKVLAEKKIPVVVGPLLTFRTKLKDLTETIAKLLKDGVLIAL-CDHPVIPLEFATVQAATA-RYGAKEEDLLKILTVNPAKILGLEDRGSIEPGKDADLVVWSGHPDKSVVERVYIDGVEVF
5	HHPRED-l	3e74_A	0.186	0.894	2.120	threading_5	LIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEV-DASGLVVSPG-VDAHTHI-----------------GYETGTRAAAKGGITT-IE-PLNQLPATVDRASIELKFDAAKGKLTIDAA--QLGGL--VS---YNIDRLHELDEVGVVGF-CFV---RDVNDWQFFKGAQKLGELGQPVLCENALICDEAKREGRVRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGT-LAKCSPPIRDLENQKG-WEKLFNGEIDCLVSDHSPCQSC-DV-FDEAVQKRG-SLP-FGKL-ATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYARITKTILRGDVI-
6	HHPRED-g	2vm8_A	0.148	0.950	2.335	threading_6	LLIKGGKIVNDDQSFYADIYMEDGLIKQIGENLIGGVKTIEAHSRMVIPGGIDVHTRFQMPDQ------GMTSADDFFQGTKAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADS--------KSCCDYSLHVDISEWHKGIQEEMEALVDHGVNSFLVYMAFKDR-FQL-TDCQIYEVLSGAIAQVHAENGDIIAEEQQRILDVEAEAVNRAITIANQTNCPLYITKVMSKSSAEVIRKKGVYGEPITASLGTDGSHYWSKAAAFVTSPPL---SPDTTPDFLNSLLSCGDLQVTGSAHCTFNTARMSVIWDAVVTGKMDENQFVAVTSTNAAKVFNLYRKGRIAVGSDADLVIWDPDSVKTSPLVVISQGKIVL
7	SP3	3mpga	0.177	0.929	3.025	threading_7	YLFKNGRYMNEEKIVATDLLVQDGKIAKVAENIADNAEVIDVNGKLIAPGLVDVHVHLREPGGEHKET--------IETGTLAAAKGGFTTICAMPNT---RPVPDCREHMEDLQNRIKEK-----AHVNVLPYGAITVQAGSEMTDFETLKE---LGAFAFTDDGVG---VQDASMMLAAMKRAAKLAHCEENTLINKGCKFSEKHGLNGIARDILLAEAADCHYHVCHVSTVRVIRDAKRAGIKVTAEVTPHHLEDDIPSADPNFKMNPP--LR--GKEDHEALIEGLLDGTIDMIATDHAPHTTAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFGL-EAGRLKEGRTADITIIDLEQEEEWPVMTIVGGKIAW
8	SAM-T99	3mpgA	0.164	0.952	2.525	threading_8	-LFKNGRYMNEEGIVATDLLVQDGKIAKVAENITDNAEVIDVNGKLIAPGLVDVHVHLREPGGE--------HKETIETGTLAAAKGGFTTICAMPNT---RPVPDCREHMEDLQNRIKEKAHVN-VLPYGAITVRQAGSEMTDFETLKELGAFAFTDDGVGVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKGCVHEGKIPSVCESVHIARDILLAEAADCHYHVCHVSTKRVIRDAKRAGVTAEVTPHHLVLEDDIPSADPNFKMNPPL----RGKEDHEALIEGLLDGTIDMIATDHAPTGFEAFPLLYTNLVKKGITLEQLIQFLTEKPADTFGL-EAGRLKEGRTADITIIDLEQEEGWPVMTIVGGKIAW
9	MUSTER	3d6nA	0.167	0.934	1.495	threading_9	LIVKNGYVIDPSQNLEGDILVENGKIKKIDKNILPEAEIIDAKGLIVCPGFIDIHVHLRDPGQTYKED--------IESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVG--------LCRVLPTGTITKRKGKEIADFYSLKEA---GCVAFTDDGSPVMDSSVMRKALELASQLGVPIDDKLAYGVINEGEVSALLGLSSIARDGILAQRTGGHVHIQHVSTLEIIEFFKEKGVKITC-NHLLFTEREVLNSGANARVNPP--LR--KKEDRLALIEGVKRGIIDCFATDHAPHQTTALPSALELYRKGIISLKKLIEMFTINPARIIGV-DLGTLKLGSPADITIFDPNKEWIKVIYTIKDGKMVY
10	SPARKS	3mpga	0.177	0.929	2.909	threading_10	YLFKNGRYMNEEGIVATDLLVQDGKIAKVAENITDNAEVIDVNGKLIAPGLVDVHVHLREPGGEHKET--------IETGTLAAAKGGFTTICAM---PNTRPVPDCREHMEDLQNRIKEK-----AHVNVLPYGAITVQAGSEMTDFETLKE---LGAFAFTDDGVG---VQDASMMLAAMKRAAKLAHCEENTLINKGCKFSEKHGLNGIARDILLAEAADCHYHVCHVSTVRVIRDAKRAGIKVTAEVTPHHLEDDIPSADPNFKMNPP--LR--GKEDHEALIEGLLDGTIDMIATDHAPHTTAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFGL-EAGRLKEGRTADITIIDLEQEEEWPVMTIVGGKIAW

Predicted Tertiary Structure


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TM-score=0.822 to 1gkrA SCOP code=b.92.1.3	TM-score=0.668 to 3be7A SCOP code=b.92.1.9	TM-score=0.826 to 1nfgA SCOP code=b.92.1.3	TM-score=0.726 to 2gokA SCOP code=b.92.1.10	TM-score=0.672 to 3be7A SCOP code=b.92.1.9