Template-based Modeling Results for PHNI_ECOLI

Submitted Primary Sequence

>Length 354
MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTGMRLERRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQQPSPHVFSLLARQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIVPEELGFAVNVGELLMTECEMVNGFIDPPGEPPHFTRGYGLVFGMSERKAMAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLKRLQQEQNHG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTGMRLERRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQQPSPHVFSLLARQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIVPEELGFAVNVGELLMTECEMVNGFIDPPGEPPHFTRGYGLVFGMSERKAMAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLKRLQQEQNHG
CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTGMRLERRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQQPSPHVFSLLARQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIVPEELGFAVNVGELLMTECEMVNGFIDPPGEPPHFTRGYGLVFGMSERKAMAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLKRLQQEQNHG
201002113300210210121222232413312121013102100120012001002200000013112100100000100121012012122232211101110011033012021100012001200102011323122222232343201201001232200323332223232012211211021110021011011000000000111111321100010100202010113212220200102001010011123332221201200000001111100000001100203312332211132310000001102000003202011101030112102311333554
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTGMRLERRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQQPSPHVFSLLARQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIVPEELGFAVNVGELLMTECEMVNGFIDPPGEPPHFTRGYGLVFGMSERKAMAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLKRLQQEQNHG
1	PROSPECT2	3fotA	0.104	0.980	1.339	threading_1	LVQRRCVGAEAIV---GLEEKNRRALPASTLLTLQNLKEMFELALLDARFEHSPESNESARDWARGCAKSALDLWSEMEEGRAAANN----TPSKSIELFLLSDVSTDSTPIPQDALFWDVGDLFRLVGSYIGRDSREMKKIQWGQEIKNLSPPVVDSLKLDNYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTRHLTQAAIVLALLDHLLSDDEVFISPTSVDLREDIASNFYAMCQTAAVVRIENLKSITVSHKDEKELQNIKKSYRQWLENPFLQALGLRVHNFEASYLHAKPIPFEGEANPLFISDGINERFIPHEIKQTATGENVTEAEVQKYLQSIVELAFRL
2	HHPRED-g	2juj_A	0.196	0.158	1.093	threading_2	---------------------------ATAS-------PQLSSEIENLMSQG--YSYQDIQKALVIAQNNIEMAKNILREFVSISSPAHVAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	PROSPECT2	1xpqA	0.091	0.901	1.309	threading_3	SWHHDTLTNPLFLEEAQLSLNDGRTRDHDKELLLEIVDNEMSKFAELEFHQHLGVSFQLVMKYLLQRRLTNDQIRYLPQLCRYLELWHGLDWKLLSAKD--------TYFGHQGRNAFLNYDSVVQRIAQSNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLERTSVTCWSQP----------LFFVNLSKSTGVASFMMLM----------------QAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENRNIIVSNWTRDPYSRGAYSACFPVDMVVAMRISDLLKLEHHH-
4	PROSPECT2	1m5ya	0.106	0.879	1.254	threading_4	VVAAVVNNESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILGVKISDEQLDQAIANINMTLDQMRSRLAYDGLNYNTY--------------------------------RNQIRKEMIISEVRNN------EVRRRITILPQEVESLAQQVTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAH-----SADQQALNGGQMGWGRIQELPGIFKGDIVGPIRSGFHILKVNDLRGESKNISVTEVHARHILIMTDEQARVKLEQIAADIAKEFSQDPGSANQGGDLGWATPDIFAFRDALTRLNKGQMSAFSEEAASWMQEQRASAYS
5	PROSPECT2	1hr6a	0.099	0.912	1.201	threading_5	LGLYIDAGGRAMAETLELLGGNYQCTSSRENLMYNQDVGKMLQLMSETVRFPKITEQELSAEYEIDEVWMKPELVLPELLHTAAYSGETLGSPLICPRGLIPSYLLDYRNKFYTPEFVGVPHEKALELTGKYLGDWQSTHPPITKKVAQYTGGESC----IPPAPVFGNLPELFHIQIGFEGLPIDHPDIYALATLQKGMYSRLYTH-------VLNQYYFVENCVAFNHS------YSDSGIFGISLSCIPAQQMYNTFANKDLRLTLKSSLLMNLESKLVELEDMGRISRVAEMIFTGNVNNAGNGKGRATVVMQGDRGSFGDVE--------------NVLKAYGLGNSSS
6	PROSPECT2	1lqta	0.122	0.924	1.201	threading_6	RIAIVGSGPSAFFAAASLLKAADTTEDLDGVAPDHPKIKSISKQFEKTAEDPRFVGEHVQPGELSERLPGSIAAVDFVGWY--NAHPHFEQVSPDLSGARAVV--------IGNGNV---ALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTDLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVL--RGYADRERPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNEELPAQLVVRSVGYRGVPTPGLRGPTGVIGTNKKDAQDTVTLIKNLGNAKEGAECKSFDHADQA------------DWLAARQPKLVTSAHWQVIDAFERARIGLG
7	MUSTER	3i0oA	0.133	0.873	0.613	threading_7	---------QPIQ-AQQLIELLKVH--GIDIHTAQFIQADTNAFAYQADSESKSY-----FIKLKYGYHDEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQHFKIIAYPFIHAPNGFTQTGKQWKQLG--KVLRQETSVPISIQQQLRKEIYS-PKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKI-----QPDLDKYVLCSDIHAG---VLVGNEESIYIIDWDEPMLAPKEFIGGGVGNVWNKPYFYEGYGEINVD--KTILSYYRHERIVEIAVYGQDLLSRNQNNQS-----RLESFKYFKEMFDPNNVVEIAFATEQL----------
8	SPARKS	2ghaa	0.145	0.898	0.595	threading_8	PKLTIWCSEKQVDILQKLGEEFKAGVEEVQYVNFQDIKSKFLTAA----PEGQGADHDWVGELAV--NGNFSDLKNFYETALNAFSYGGYGIPYAMEAIALIYN-KDYVPEPP------KTMDELIEIAK-QIDEEFGGEVRGFITSAAEFY-YIAPFIFGYG--GYVFKQTEKGLDVNDIGLANEGAIKGVKLLKRLVDEGILPSDNYQIMDSMFRE---------GQAAMIINGPDAGIDYGVAPIP----------DLEPGVPARPFVGQGFMVAKSPNKLLAIEFLTSFIAMYRIYLGDPRLPSRKDVLELVKDNPDVVGFTLSAAMPNVPQMAAVWAAMNDALNLVVNG
9	PROSPECT2	1b5qa	0.108	0.912	1.186	threading_9	PRVIVVGAGMSISAAKRLSEAGITDNGGKMNPIWPIVNSTLKLAQNVYKEDGGVYDEDYVQKRIEL----ADSVEEMGEKLSATLH------ASGRDDMSILAMQRLNEHQPNGPA--TPVDMVVDYYKFDYEFAEPPRVTSLQNTADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKG------REFFLYASSRRGYYGVWQ-------------EFEKQYPDANVLLVTVTDQSDEQTKAEIMQVLRKMFPGKDVPDAWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGYNGYVHGAYLSGIDSCAQKKMC
10	PPA-I	2z6vA1	0.105	0.537	0.730	threading_10	------SDFDNITTADDVFKLAAQR-TGLSEIDSDSWREGLALIVDEVNTSPVF-TPFGRQRVLDDATN-ALGRRLQVHAYIQDHPEVLDAPVLLHWQC-------VHPIPPASTETLRTDPRCLALLDEQRKILDAVTRAKMPLWEDADGPTEDMFIHNQDF--------------KGLSWDSFLPTDRYARWLFDEADMSSTYEYQKRYLQVLQSTAP--------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.578 to 1q9jB SCOP code=c.43.1.2	TM-score=0.373 to 1xb2B SCOP code=a.5.2.2	TM-score=0.464 to 1b5qB SCOP code=c.3.1.2	TM-score=0.571 to 1m5yD SCOP code=a.223.1.2	TM-score=0.536 to 1hr6A SCOP code=d.185.1.1