Template-based Modeling Results for PGPB_ECOLI


  Submitted Primary Sequence

>Length 254
MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPAEENREIAQREQES
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPAEENREIAQREQES
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPAEENREIAQREQES
32210220110000000000000011131212321200100000021012110000000000000000312030000000000000000100220022003222111220142221213211203321102002210233330131011112322111011100000000000000001121100000000000000000000000000100000000000000000100120013122323333312433344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPAEENREIAQREQES
1MUSTER1eoiA0.1840.7281.134threading_1AFLNDQAMYEQGRLLRNTERGKLAAEDANL-----SSGGVANAFSGAFGSP-----------------ITEKDAPALHKLLTNMIEDAGDLATRSAKDHYMRIRPFAFY-----------------------------VSTCNTTEQDKL---SKNGSYPSGHTSIGWATALVLAEINPQR-----QNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHPAFQQQLQKA------KAEFAQH----
2SPARKS1d2ta0.1860.8272.302threading_2-----------------------GNDTTTKPDLYYLKNSEAINSLALLPPPVGSIAFLNDQAMYEQGRLLRNTERGKLAAEDANLSSGG--VANAFSGAFGSP------ITEKDAPALHKLLTNMIEDAGDLATRSAKDHYMRISTCNTQDKLSKNGSYPSGHTSIGWATALVLAEINPQR-----QNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHPAFQQQLQKA------KAEFAQHQK--
3PROSPECT22a96A0.1490.7951.897threading_3QPFHSPEESVNSQFYYDKEAYFKGYAIK-----GSPRWKQAAEDADIS---VENIARIFSPVVGAKISPKDTPETWNMLQNL--LKVGGYYATASAKKYYMRTRPFVLF-------------------------------NHSTCRPEDENTLRKDGSYPSGHTAYSTLLALVLSQARPERAQ-----ELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLIPAFQKSLAKV------REELNDKNNLL
4PPA-I2akcB0.1250.7871.409threading_4SVNSQFYLDPAFRYDKEAYFKGYAIKGS---------PRWKQAAEDADISVENIARIFSPVVGAKI---SPKDTPETWNMLQNLLKVGGYYATASAKKYYMRTRPFVLFNHSTCRPE-------------------------------DENTLRKDGSYPSGHTAYSTLLALVLSQARPER-----AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQPAFQKSLA------KVREELNDKNNLL
5HHPRED-l2ipb_A0.1780.7285.183threading_5----------------MQP---FHSPEELPPGNDDPWKQAAEDADISVENIARIFSPV-------VGAKINPKDTPETWNMLQLLKMGGYYATASAKKYYMRTRPFVLF---NHST----------------------------CRPEDENTLRKDGSYPSGHDAYSTLLALVLSQARPERA-----QELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQT-IPAFQKS---LAKVREELNDKN---
6HHPRED-g2ipb_A0.1600.7405.161threading_6DPAFRYDKEAYF---------------KGYAIGSPRWKQAAEDADISVENIARIFSPVV-------GAKINPKDTPETWNMLNLLKMGGYYATASAKKYYMRTRPFVLFNHSTCRPE----------------------------D---ENTLRKDGSYPSGHDAYSTLLALVLSQARPER-----AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQT-IPAFQKSLAKVREELNDS-------
7SP31d2ta0.1740.7912.358threading_7LYYLKNSEAI--NSLALLPP-----PPAVGSIAFLNDQAMYEQGRLLRNTERGKLAAEDANLSSGGVANAEKDAPALHKLLTNMIEDAGDLATRSAKDHYMRIRPFAFYGVSTCNT---------------------------------QDKLSKNGSYPSGHTSIGWATALVLAEINPQR-----QNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHPAFQQQLQKA------KAEFAQHQK--
8SAM-T992akcB0.1600.6422.979threading_8---------RWKQAAEDADISVENIAR---------------------------IFSPVVGAKISP-----KDTPETWNMLQNLLKVGGYYATASAKKYYMRTRPFVLF--NHSTCRPED-----------------------------ENTLRKDGSYPSGHTAYSTLLALVLSQARPERA-----QELARRGWEFGQSRVICGAHWQSDVDAGRYVG------AVEFARLQTIPAFQKSLAKVR--------
9MUSTER2akcB0.1370.7761.096threading_9SVNSQFYL---PAFRYDKEAYFKGY------AIKGSPRWKQAAEDADISVENIARIFSPVVGAKI----SPKDTPETWNMLQNLLKVGGYYATASAKKYYMRTRPFVLF-----------------------------HSTCRPEDENTL---RKDGSYPSGHTAYSTLLALVLSQARPER-----AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQPAFQKSLAK-------REELNDKNNLL
10SPARKS2a96a0.1420.7482.178threading_10AFRYDKEAYFKGYAIKGSPRWKQAAE-----DADISVENIARIFSPVVGAKI-----------------SPKDTPETWNMLQNLLKVGGYYATASAKKYYMRTRPFVLF-------------------------------NHSTCRPEDENTLRKDGSYPSGHTAYSTLLALVLSQARPER-----AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQPAFQKSLAKV------REELNDKNNLL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.768 to 1eoiA
SCOP code=a.111.1.1
TM-score=0.758 to 1eoiA
SCOP code=a.111.1.1
TM-score=0.841 to 1eoiA
SCOP code=a.111.1.1
TM-score=0.778 to 1eoiA
SCOP code=a.111.1.1
TM-score=0.784 to 1eoiA
SCOP code=a.111.1.1