Template-based Modeling Results for PANF_ECOLI

Submitted Primary Sequence

>Length 483
MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMGGIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILARRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYETGLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVQTLQTIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIGTIVVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMSTINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFHPIVPSLLLSLLAFLVGNRFGTSVPQATVLTTDK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMGGIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILARRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYETGLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVQTLQTIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIGTIVVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMSTINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFHPIVPSLLLSLLAFLVGNRFGTSVPQATVLTTDK
CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMGGIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILARRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYETGLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVQTLQTIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIGTIVVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMSTINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFHPIVPSLLLSLLAFLVGNRFGTSVPQATVLTTDK
451110000000000000000000124332321310000122000000000000000000000000010031000000000010000000000002100200331200001100222222311100000000000000000100000200210111112000000000000000000010000010010000000000000000220101110010022112310123113211100000000000000000121001100103323101200000000000000000000000100123121121000100130001100000000000000010010010000000200023024332333220210000000000000000012222100100100000000000000000000330101000000000000000000121310111100000000000000012013312321222135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMGGIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILARRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYETGLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVQTLQTIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIGTIVVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMSTINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFHPIVPSLLLSLLAFLVGNRFGTSVPQATVLTTDK
1	MUSTER	3dh4A	0.191	0.923	2.817	threading_1	-------------------------GGGGGGGGGGGGGAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAI----ASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIPLMYSILGLALFALVYSIVV------WTDVIQVFFLVLGGFMTTYMAVSFIGGWFAGVSKMVDAAPGHFEMILMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITPSAANADKAYPWLTQF-LPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDS-GDHKLVNVGRTAAVVALIIACLIALGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSDDDPKGISVTSS
2	SPARKS	2xq2a	0.187	0.942	9.847	threading_2	-SFIDIMVFAIYVAIIIGVGLWV------------------SLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKY----FLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIPLMYSILGLALFALVYSIYGG---VVWTDVIQVFFLVLGGFMTTYMAVSFIGGWFAGVSKMVDAAPGHFEMILDQSNPIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLALIVPFLVVLPGIAAYVITSDAANADKAYPWLTQF-LPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDS-GDHKLVNVGRTAAVVALIIAALIAPMGIGQCFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPGISVTS
3	PROSPECT2	3dh4A	0.181	0.940	4.425	threading_3	G------------------GGG---GGGGGGGGGGGGGAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEW----MSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIPLMYSILGLALFALVYSIVVWTDVIQVFFLVLGGFMTTYMAVSFIGG---TDGWFAGVSKMVDAAPGHFEMILDQSNPQYVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDSAANADKAYPWLTQFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDS-GDHKLVNVGRTAAVVALIIACLIAPGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDLFWVLYK
4	PPA-I	3dh4A	0.190	0.917	3.959	threading_4	---------------------GGGGGGGGGGGGGGGGGAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAI----ASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIPLMYSILGLALFALVYSIVV------WTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAGVSKMVDAAPGHFEMILDQSAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITPSAANADKAYPWLTQF-LPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDS-GDHKLVNVGRTAAVVALIIACLIAPGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSIND-------DD
5	HHPRED-l	2xq2_A	0.190	0.938	9.801	threading_5	-SFIDIMVFAIYVAIIIGVGLWVS------------------LPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMS----AITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKK-LKTILAVFWILYIFVNLTSVLYLGGLALETILGIPLMYSILGLALFALVYSIYGG---VVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAKMVDAAPGHFEMILSNPLPGIAVLIGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLALIVPFLVVLPGIAAYVILPSAANADKAYPWLT-QFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDS-GDHKLVNVGRTAAVVALIIAALIAPGGIGQCFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPKGSVT-
6	HHPRED-g	2xq2_A	0.189	0.940	8.441	threading_6	-SFIDIMVFAIYVAIIIGVGLWVS------------------LPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEW----MSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFN-KKLKTILAVFWILYIFVNLTSVLYLGGLALETILGIPLMYSILGLALFALVYSIYGG---VVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAKMVDAAPGHFEMILDQSNPGIAVLIGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLALIVPFLVVLPGIAAYVILPSAANADKAYPWLT-QFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPD-SGDHKLVNVGRTAAVVALIIAALIAPMGIGQCFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPKISVTS
7	SP3	2xq2a	0.185	0.942	9.906	threading_7	-SFIDIMVFAIYVAIIIGVGLWV------------------SLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKY----FLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIPLMYSILGLALFALVYSIYGG---VVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAGVSKMHFEMILDQSNPQYMNLPGIAGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLALIVPFLVVLPGIAAYVITSDAANADKAYPWLTQ-FLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDS-GDHKLVNVGRTAAVVALIIAALIAPMGIGQCFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPGISVTS
8	SAM-T99	3dh4A	0.198	0.880	9.956	threading_8	--------------------------------------AGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIAS----YEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFN-KKLKTILAVFWISLYIFNLTSVLYLGGLALETILGIPLMYSILGLALFALVYSI------VVWTDVIQVFFLVLGGFMTTYMAVSFIGGWFAGVSKMVDAAPDQSNPQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDAANADKAYPWL-TQFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPD-SGDHKLVNVGRTAAVVALIIACLIAPMLGGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDD-------
9	MUSTER	3gi9C	0.140	0.874	1.290	threading_9	--------------------------MELKN---------KKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKI---VSNAGPIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLIAINTFNIAITEIGIVAFFTALNGSKAVGRAEFFIVLVKLLILGLFIFAGL--------------TIHPSYVIPDLAP----SAVSGMIFASAIFFLSYMGFGVITNASIENKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFE--RKVWFKSTEGLYITSALGVLFALLFN---MEGVASITSAVFMVIYLFVILSHYILIGRKEIVIFSFIVVLGVFLLLLYYQWNRFVFYGIIATFIGVLIFEIIYRKVTKTFSNNMYVKSLE
10	SPARKS	3dh4a	0.199	0.896	9.003	threading_10	--------------------------------------AGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYE----WMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIPLMYSILGLALFALVYS------IVVWTDVIQVFFLVLGGFMTTYMAVSFIGGWFAGVSKMVDAAPGHFEMILDQSNPQAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDAANADKAYPWLTQF-LPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDS-GDHKLVNVGRTAAVVALIIACLIAPMGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSNDDDPKGISVTSSM

Predicted Tertiary Structure


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TM-score=0.572 to 2q6hA SCOP code=f.54.1.1	TM-score=0.568 to 2q6hA SCOP code=f.54.1.1	TM-score=0.575 to 2q6hA SCOP code=f.54.1.1	TM-score=0.587 to 2q6hA SCOP code=f.54.1.1	TM-score=0.575 to 2q6hA SCOP code=f.54.1.1