Template-based Modeling Results for PANE_ECOLI

Submitted Primary Sequence

>Length 303
MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESEYERIGTGLPRPW
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESEYERIGTGLPRPW
CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHEEEEECCCCEECCCEECCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEEEEEEEECCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESEYERIGTGLPRPW
210000000000000000003222201001122222100101223121123202012231122000000003112122003000210222000000110011220023023300000000001132210011110000001123321101100100321213010132010100110000000000000120211202211310130020001002422131223101200120132113110000110334330111100010021033220200101100200221221133223222333
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESEYERIGTGLPRPW
1	MUSTER	2ofpB	1.000	0.967	2.941	threading_1	MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESEYE----------
2	SPARKS	1ks9a	1.000	0.960	4.172	threading_2	MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESE------------
3	PROSPECT2	3i83A	0.228	0.983	4.259	threading_3	LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDYETVKIRSATLGDYTFRPAAVVRSAAELTKPDCTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAADNEVISGLAFIGVTRTPGEIWHQAYGRLMLGNYPGGSERVKTLAAAFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDITQEGFVRAIMQEIRAVAAANGHPLP-EDIVEKNVASTYKMPPYKTSMLVDFEAGQPMETEVILGNAVRAGRRTRVAIPHLESVYALMKLLELRTSKSLWGN----
4	PPA-I	2ofpB	1.000	0.967	3.166	threading_4	MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESEYE----------
5	HHPRED-l	1ks9_A	1.000	0.960	3.070	threading_5	MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESE------------
6	HHPRED-g	3i83_A	0.227	0.974	3.335	threading_6	LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD-YEKGIRIRSTLGDYTFPAAVVRSAAELPDCT--LLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFNEVISGLAFIGVTRTAPEIWHQAYGRLMLGNYPGGSERVKTLAAAFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGLDTLDILSTQGFVRAIMQEIRAVAAANGHPLPEDIVEKNV-ASTYKMPPYKTSMLVDFEAGQPMETEVILGNAVRAGRRTRVAIPHLESVYALMKLLELRTSKSLWGN----
7	SP3	1ks9a	1.000	0.960	4.274	threading_7	MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESE------------
8	SAM-T99	2ofpB	1.000	0.967	4.478	threading_8	MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESEYE----------
9	MUSTER	3g17G	0.198	0.950	2.557	threading_9	LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKT---ITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLEHIP--FKNVCQAVVYISGQKKGDVVTHFRDYQLRIQD----NALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMPEIRILCRQLLLDGCRVAQAEGLNFSEQTVDTIMTIYQGYPDEMGTSMYYDIVHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNEGHHHH------
10	SPARKS	3hn2a	0.241	0.957	3.643	threading_10	-RIAIVGAGALGLYYGALLQRSGEDVHFLLRRDYEAIALKVFSINGDFTLPHVKGRAPEEIGPMDLVLVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNEEALATLFGRIIGGVAFLCSNRGEPEVHHLGAGRIILGEFLPDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARRKLVRGIMLEVIAGANAQGLATFADGYVDDMLEFTDAMGEYKPSMEIDREEGRPLEIAAIFRTPLAYGAREGIAMPRVEMLATLLEQATGE------------

Predicted Tertiary Structure


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TM-score=0.982 to 2ofpB TM-score=0.912 to native SCOP code=a.100.1.7	TM-score=0.982 to 2ofpB TM-score=0.912 to native SCOP code=a.100.1.7	TM-score=0.862 to 2ofpB TM-score=0.971 to native SCOP code=a.100.1.7	TM-score=0.796 to 2ofpB TM-score=0.862 to native SCOP code=a.100.1.7	TM-score=0.982 to 2ofpB TM-score=0.912 to native SCOP code=a.100.1.7

Experimental Structure

Download 1yjqA

SCOP code=a.100.1.7