Template-based Modeling Results for PAGP_ECOLI

Submitted Primary Sequence

>Length 186
MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
CCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHEECCCCCCCCEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
551220110000000101000211220330021012001310422321100000000002011233102311321100000102112401000000000111133111000100100011113330200000000000112111010000000000111200000010111231000000001032
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
1	MUSTER	1mm5A	0.994	0.871	4.097	threading_1	------------------------MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
2	SPARKS	1mm4a	0.994	0.871	5.434	threading_2	------------------------MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
3	PROSPECT2	1mm4a	0.994	0.871	3.241	threading_3	MNA------------------------DEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
4	PPA-I	1mm5A	0.994	0.871	8.530	threading_4	------------------------MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
5	HHPRED-l	3gp6_A	0.993	0.823	12.855	threading_5	------------------------MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAY--------NERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQ-
6	HHPRED-g	3gp6_A	0.994	0.828	11.535	threading_6	------------------------MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAY--------NERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
7	SP3	1mm4a	0.994	0.871	2.381	threading_7	------------------------MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
8	SAM-T99	1mm5A	0.994	0.871	11.111	threading_8	------------------------MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
9	MUSTER	1ib1E	0.201	0.801	0.600	threading_9	LTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELWFVEGRLVAFIIGSLWD-------------EERLTQESLALHR--PRGHSAHLHALAVHRSFRQ-----GKGSVLLWRYLHH---AQPAVRRAVLMCED--ALVPF------QRFGFHPAGPCAIVV------GSLTFTEMHCSL
10	SPARKS	1nsla	0.176	0.823	0.699	threading_10	LEPKDAERLAELIIQNQQRLGKFFSSADTYRETIIPDWRRQYADLNGIEAGLLY-----------------DGSL--CGISLHNLDQVNRKAEIGYWIAKEFEGK-----GIITAAC-RKLITYAFELELNRVAICAAVGNEKSRAV-----PERIGF---LEEGKARDGLYVNGLVYYSLLKREW

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.814 to 1mm5A TM-score=0.623 to native SCOP code=f.4.1.2	TM-score=0.815 to 1mm5A TM-score=0.605 to native SCOP code=f.4.1.2	TM-score=0.613 to 1mm5A TM-score=0.577 to native SCOP code=f.4.1.2	TM-score=0.602 to 1mm5A TM-score=0.582 to native SCOP code=f.4.1.2	TM-score=0.814 to 1mm5A TM-score=0.623 to native SCOP code=f.4.1.2

Experimental Structure

Download 3gp6A

SCOP code=f.4.1.1