Template-based Modeling Results for PAAX_ECOLI

Submitted Primary Sequence

>Length 316
MSKLDTFIQHAVNAVPVSGTSLISSLYGDSLSHRGGEIWLGSLAALLEGLGFGERFVRTALFRLNKEGWLDVSRIGRRSFYSLSDKGLRLTRRAESKIYRAEQPAWDGKWLLLLSEGLDKSTLADVKKQLIWQGFGALAPSLMASPSQKLADVQTLLHEAGVADNVICFEAQIPLALSRAALRARVEECWHLTEQNAMYETFIQSFRPLVPLLKEAADELTPERAFHIQLLLIHFYRRVVLKDPLLPEELLPAHWAGHTARQLCINIYQRVAPAALAFVSEKGETSVGELPAPGSLYFQRFGGLNIEQEALCQFIR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKLDTFIQHAVNAVPVSGTSLISSLYGDSLSHRGGEIWLGSLAALLEGLGFGERFVRTALFRLNKEGWLDVSRIGRRSFYSLSDKGLRLTRRAESKIYRAEQPAWDGKWLLLLSEGLDKSTLADVKKQLIWQGFGALAPSLMASPSQKLADVQTLLHEAGVADNVICFEAQIPLALSRAALRARVEECWHLTEQNAMYETFIQSFRPLVPLLKEAADELTPERAFHIQLLLIHFYRRVVLKDPLLPEELLPAHWAGHTARQLCINIYQRVAPAALAFVSEKGETSVGELPAPGSLYFQRFGGLNIEQEALCQFIR
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKLDTFIQHAVNAVPVSGTSLISSLYGDSLSHRGGEIWLGSLAALLEGLGFGERFVRTALFRLNKEGWLDVSRIGRRSFYSLSDKGLRLTRRAESKIYRAEQPAWDGKWLLLLSEGLDKSTLADVKKQLIWQGFGALAPSLMASPSQKLADVQTLLHEAGVADNVICFEAQIPLALSRAALRARVEECWHLTEQNAMYETFIQSFRPLVPLLKEAADELTPERAFHIQLLLIHFYRRVVLKDPLLPEELLPAHWAGHTARQLCINIYQRVAPAALAFVSEKGETSVGELPAPGSLYFQRFGGLNIEQEALCQFIR
4431221022014222120100000000100143212000000010021021233001000110253210102221221000003301300230123013133222212000000222342102201410311100200200000013222101200330212320000102122222521021002300302201200220031022002203422331123100000010021001002201200330012311022002001200320021022001210211213112112200320210322132002225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSKLDTFIQHAVNAVPVSGTSLISSLYGDSLSHRGGEIWLGSLAALLEGLGFGERFVRTALFRLNKEGWLDVSRIGRRSFYSLSDKGLRLTRRAESKIYRAEQPAWDGKWLLLLSEGLDKSTLADVKKQLIWQGFGALAPSLMASPSQKLADVQTLLHEAGVADNVICFEAQIPLALSRAALRARVEECWHLTEQNAMYETFIQSFRPLVPLLKEAADELTPERAFHIQLLLIHFYRRVVLKDPLLPEELLPAHWAGHTARQLCINIYQRVAPAALAFVSEKGETSVGELPAPGSLYFQRFGGLNIEQEALCQFIR
1	MUSTER	3l09C	0.182	0.782	1.846	threading_1	SDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVER--LQPQ-ARVALHRLKRDGWVESRRLGRVGFHRLSDSALTQTRAVAGRIYGP--GAGPAPWHLAGPPDAPD----GLSLLPDTLSATPISRRFALICGPLE----------DVPEDWLLTA------PSGRGLPVWVQDVVVEAGCEAEFKALERTLAQI------DKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRARVHQLLDQLGSVEPDW--------------------------------------
2	SPARKS	3l09a	0.194	0.782	4.250	threading_2	SDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVER-GLQPQ-ARVALHRLKRDGWVESRRLGRVGFHRLSDSALTQTRAVAGRIYGP--GAGPAPWHLAGPPDAP-DGLSLLPDTLSATPIS---RRFALICGPLED----------VPEDWLLTA------PSGRGLPVWVQDVVVEAGCEAEFKALERTLAQI------DKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRARVHQLLDQLGSVEPD---------------------------------------
3	PROSPECT2	3l09A	0.174	0.782	2.889	threading_3	SDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSF--VERGLQPQARVALHRLKRDGWVESRRLGRVGFHRLSDSALTQTRAVAGRIYGP--GAGPAPWHLAGPPDAPD----GLSLLPDTLSATPISRRFALICGPLEDVPEDWLLTAPSGRGL----------------PVWVQDVVVEAGCEAEFKALERTLAQI------DKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRARVHQLLDQL------------------GSVEP---------------------D
4	PPA-I	3l09C	0.181	0.785	2.636	threading_4	SDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVERGLQPQ--ARVALHRLKRDGWVESRRLGRVGFHRLSDSALTQTRAVAGRIYGP--GAGPAPWHLAGPPDAPDGLSLLPD----TLSATPISRRFALICGPL----------EDVPEDWLLTA------PSGRGLPVWVQDVVVEAGCEAEFKALERTLAQI------DKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRARVHQLLDQLGSVEPDW--------------------------------------
5	HHPRED-l	3kfw_X	0.255	0.696	7.450	threading_5	---------------SLTARSVVLSLLGA----HPAWATASELIQLTADFGIKETTLRVALTR-VGAGDLVR----SADGYRLSDRLLARQRRQDEA-R-PRTRAWHGNWH-LIVTIGTARTRAALRTC-HHKRFGELREGVW-RPDNLDLDLES-----DVAARVR-LTAR------DEAPADLAGQLWDLSGWTEAGHRLLGD-AAAT----------D-PGRFVVAAA-VR----HLLTDP-LPAELLPADWPGAGLRAAYHDFATA-AKRRDATQ--L----------------------------------
6	HHPRED-g	3kfw_X	0.255	0.696	6.442	threading_6	---------------SLTARSVVLSLLGA----HPAWATASELIQLTADFGIKETTLRVALTR-VGAGDLVR----SADGYRLSDRLLARQRRQDEA-R-PRTRAWHGNWH-LIVTIGTARTRAALRTC-HHKRFGELREGVW-RPDNLDLDLES-----DVAARVR-LTAR------DEAPADLAGQLWDLSGWTEAGHRLLGD-AAA----------TD-PGRFVVAAA-VR----HLLTDP-LPAELLPADWPGAGLRAAYHDFATA-AKRRDATQ--L----------------------------------
7	SP3	3l09a	0.198	0.782	4.466	threading_7	SDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVE-RGLQPQ-ARVALHRLKRDGWVESRRLGRVGFHRLSDSALTQTRAVAGRIYGPG--AGPAPWHLAGPPDAP-DGLSLLPDTLSATPISRR---FALICGPLED----------VPEDWLLTA------PSGRGLPVWVQDVVVEAGCEAEFKALERTLAQI------DKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRARVHQLLDQL-----------------GSVEPD----------------------
8	SAM-T99	3kfwX	0.246	0.668	3.964	threading_8	----------------LTARSVVLSVL---LGAHPAWATASELIQLTADFGIKETTLRVALTR-VGAGDLVRSADG----YRLSDRLLARQRRQDEAR--PRTRAWHGNWHLIVTSIGTDARRAALR---HHKRFGELREGVW-RPDNLDLDLES-------DVAARVRLTARDEA--P---ADLAGQLWDLSGWTEAGHRLLGDAA------------ATDPGRFVVAAAV-----RHLLTDP-LPAELLPADWPGAGLRAAYHDFATAA---------------------------------------------
9	MUSTER	3kfwX	0.215	0.706	1.540	threading_9	---------------SLTARSVVLSVLLG---AHPAWATASELIQLTADFGIKETTLRVALTRVGAGDLVRSAD-GYRLSDRLLARQRRQDEA------RPRTRAWHGNWHLIVTSIGTDARTRAALRTCHHKRFGELREGVWR-PDNLDLDL-----ESDVAARVRL-------TARDEAPADLAGQLWDLSGWTEAGHRLLGD------------AAATDPGRFVVAAAVRH-----LLTDP-LPAELLPADWPGAGLRAAYHDFATAAKRRDATQL-------------------------------------
10	SPARKS	3kfwx	0.202	0.706	4.054	threading_10	---------------SLTARSVVLSVL---LGAHPAWATASELIQLTADFGIKETTLRVALTRVGAGDLVRSAD-GYRLSDRLLARQRRQDEA------RPRTRAWHGNWHLIVTSIGTDARTRAALRTCHHKRFGELREGVWRPDNLD----------LDLESDVAAR---VRLTARDEAPADLAGQLWDLSGWTEAGHRLLGDAA------------ATDPGRFVVAAAVRH-----LLTDP-LPAELLPADWPGAGLRAAYHDFATAAKRRDATQL-------------------------------------

Predicted Tertiary Structure


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TM-score=0.470 to 2obpA SCOP code=a.4.5.71	TM-score=0.467 to 2obpA SCOP code=a.4.5.71	TM-score=0.471 to 2obpA SCOP code=a.4.5.71	TM-score=0.472 to 2obpA SCOP code=a.4.5.71	TM-score=0.470 to 2obpA SCOP code=a.4.5.71