Template-based Modeling Results for PAAK_ECOLI

Submitted Primary Sequence

>Length 437
MITNTKLDPIETASVDELQALQTQRLKWTLKHAYENVPMYRRKFDAAGVHPDDFRELSDLRKFPCTTKQDLRDNYPFDTFAVPMEQVVRIHASSGTTGKPTVVGYTQNDIDNWANIVARSLRAAGGSPKDKIHVAYGYGLFTGGLGAHYGAERLGATVIPMSGGQTEKQAQLIRDFQPDMIMVTPSYCLNLIEELERQLGGDASGCSLRVGVFGAEPWTQAMRKEIERRLGITALDIYGLSEVMGPGVAMECLETTDGPTIWEDHFYPEIVNPHDGTPLADGEHGELLFTTLTKEALPVIRYRTRDLTRLLPGTARTMRRMDRISGRSDDMLIIRGVNVFPSQLEEEIVKFEHLSPHYQLEVNRRGHLDSLSVKVELKESSLTLTHEQRCQVCHQLRHRIKSMVGISTDVMIVNCGSIPRSEGKACRVFDLRNIVGA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MITNTKLDPIETASVDELQALQTQRLKWTLKHAYENVPMYRRKFDAAGVHPDDFRELSDLRKFPCTTKQDLRDNYPFDTFAVPMEQVVRIHASSGTTGKPTVVGYTQNDIDNWANIVARSLRAAGGSPKDKIHVAYGYGLFTGGLGAHYGAERLGATVIPMSGGQTEKQAQLIRDFQPDMIMVTPSYCLNLIEELERQLGGDASGCSLRVGVFGAEPWTQAMRKEIERRLGITALDIYGLSEVMGPGVAMECLETTDGPTIWEDHFYPEIVNPHDGTPLADGEHGELLFTTLTKEALPVIRYRTRDLTRLLPGTARTMRRMDRISGRSDDMLIIRGVNVFPSQLEEEIVKFEHLSPHYQLEVNRRGHLDSLSVKVELKESSLTLTHEQRCQVCHQLRHRIKSMVGISTDVMIVNCGSIPRSEGKACRVFDLRNIVGA
CCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCCHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEECCCCCEEEECCEEECHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MITNTKLDPIETASVDELQALQTQRLKWTLKHAYENVPMYRRKFDAAGVHPDDFRELSDLRKFPCTTKQDLRDNYPFDTFAVPMEQVVRIHASSGTTGKPTVVGYTQNDIDNWANIVARSLRAAGGSPKDKIHVAYGYGLFTGGLGAHYGAERLGATVIPMSGGQTEKQAQLIRDFQPDMIMVTPSYCLNLIEELERQLGGDASGCSLRVGVFGAEPWTQAMRKEIERRLGITALDIYGLSEVMGPGVAMECLETTDGPTIWEDHFYPEIVNPHDGTPLADGEHGELLFTTLTKEALPVIRYRTRDLTRLLPGTARTMRRMDRISGRSDDMLIIRGVNVFPSQLEEEIVKFEHLSPHYQLEVNRRGHLDSLSVKVELKESSLTLTHEQRCQVCHQLRHRIKSMVGISTDVMIVNCGSIPRSEGKACRVFDLRNIVGA
55223311321102231122101310220021014202100310330202032033021034011113310241121321111231000000021132201000001200100010001002002023311000010100000000000002300000000121203200200222201000000000010021014322232220201000000220232013101420102000000002111000002023223000002210100001133122023122010000111331000010103100100111131132132010202100002011000110120013033112000010224332210000010232222223211220032013102320202010100222303324120110002242334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MITNTKLDPIETASVDELQALQTQRLKWTLKHAYENVPMYRRKFDAAGVHPDDFRELSDLRKFPCTTKQDLRDNYPFDTFAVPMEQVVRIHASSGTTGKPTVVGYTQNDIDNWANIVARSLRAAGGSPKDKIHVAYGYGLFTGGLGAHYGAERLGATVIPMSGGQTEKQAQLIRDFQPDMIMVTPSYCLNLIEELERQLGGDASGCSLRVGVFGAEPWTQAMRKEIERRLGITALDIYGLSEVMGPGVAMECLETTDGPTIWEDHFYPEIVNPHDGTPLADGEHGELLFTTLTKEALPVIRYRTRDLTRLLPGTARTMRRMDRISGRSDDMLIIRGVNVFPSQLEEEIVKFEHLSPHYQLEVNRRGHLDSLSVKVELKESSLTLTHEQRCQVCHQLRHRIKSMVGISTDVMIVNCGSIPRSEGKACRVFDLRNIVGA
1	MUSTER	2y4oA	0.670	0.984	3.621	threading_1	P--AAALEPIETASRDELQALQLERLKWSLRHAYDNVPHYRRTFDAAGVHPDDLKSLADLAKFPFSTKNDLRDNYPFGLFAVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQ-GMDPAESSLKIGIFGAEPWTQALRNEVETRVGIDALDIYGLSEVMGPGVACECVETKDGPVIWEDHFYPEIIDPVTGEVLPDGSQGELVFTSLTKEAMPVIRYRTRDLTALLPPTARAMRRLAKITGRSDDMLIVRGVNVFPSQIEEIVVALPLLSGQFQITLSRDGHMDRLDLAVELRSEAASVTDGERAALARELQHRIKTMVGVSSGVTVLAAGGIPTATGKARRVIDRRQ----
2	SPARKS	2y27a	0.636	0.950	6.495	threading_2	------LEPIETASRDELTALQLERLKWSLRHAYDHSPVYRRKFDEAGVHPDDLKTLADLSRFPFTTKGDLRDSYPFG-FAVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGGGQTEKQVQLIQDFRPDII-VTPSY-LSIADEIERQ-GLDPVQSSLRIGIFGAEPWTND-RVAIEQR-GIDAVDIYGLSEV-GPGVASECVETKDGPTIWEDHFYPEIIDPETGEVLPDGELGELVFTSLTKEALPIIRYRTRDLTRLLP--GTARTRREKITGRSDDI--VRGVNVFPTQIEEQLLKQRALAPHYQIVLTKEGPLDVLTLNVEPCPETAPD-TAAIQVAKQALAYDIKSLIGVTAVINVLPVNGIERSVGKARRVVDKRK----
3	PROSPECT2	2y4oA	0.666	0.986	6.837	threading_3	HP-AAALEPIETASRDELQALQLERLKWSLRHAYDNVPHYRRTFDAAGVHPDDLKSLADLAKFPFSTKNDLRDNYPFGLFAVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVR-QGMDPAESSLKIGIFGAEPWTQALRNEVETRVGIDALDIYGLSEVMGPGVACECVETKDGPVIWEDHFYPEIIDPVTGEVLPDGSQGELVFTSLTKEAMPVIRYRTRDLTALLPPTARAMRRLAKITGRSDDMLIVRGVNVFPSQIEEIVVALPLLSGQFQITLSRDGHMDRLDLAVELRSEAASVTDGERAALARELQHRIKTMVGVSSGVTVLAAGGIPTATGKARRVIDRRQ----
4	PPA-I	2y4oA	0.668	0.986	6.076	threading_4	-HPAAALEPIETASRDELQALQLERLKWSLRHAYDNVPHYRRTFDAAGVHPDDLKSLADLAKFPFSTKNDLRDNYPFGLFAVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQ-GMDPAESSLKIGIFGAEPWTQALRNEVETRVGIDALDIYGLSEVMGPGVACECVETKDGPVIWEDHFYPEIIDPVTGEVLPDGSQGELVFTSLTKEAMPVIRYRTRDLTALLPPTARAMRRLAKITGRSDDMLIVRGVNVFPSQIEEIVVALPLLSGQFQITLSRDGHMDRLDLAVELRSEAASVTDGERAALARELQHRIKTMVGVSSGVTVLAAGGIPTATGKARRVIDRRQ----
5	HHPRED-l	3qov_A	0.446	0.934	4.060	threading_5	-STQYWEEEIEI-SREKLQELQLQRLKKTINIA-ANSPYYKEVFSKNGITGDSIQSLDDIRKIPFTTKSD-RANYPFGLVAGD-RDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLY-VGIRKTDVFQNSSGYG-FTGGLGFQYGAERLGCLTVPAAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEG-IDPRETTLKTLVIGAEPHTDEQRRKIER-LNVKAYNSFG-TE-NGPGVAFECQE-QNG-HFWEDCYLVEIIDPETGEPVPEGEIGELVLTTLDRE--PLIRYRTRDLTRILCPCGRTHLRIDRIKGRSDD-FIIKGVNIFP-QVEKILVQFPELGSNYLITLETVNNQDE-IVEVELSDLST-DNYIELEKIRRDIIRQLKDEILVTPKVKLVKKGSLP-------RVKDLRDN---
6	HHPRED-g	3qov_A	0.443	0.929	4.712	threading_6	QYWEE---EIEI-SREKLQELQLQRLKKTINIA-ANSPYYKEVFSKNGITGDSIQSLDDIRKIPFTTKSD-RANYPFGLVAGD-RDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLY-VGIRKTDVFQNSSGYG-FTGGLGFQYGAERLGCLTVPAAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEG-IDPRETTLKTLVIGAEPHTDEQRRKIER-LNVKAYNSFG-TE-NGPGVAFECQE-QNG-HFWEDCYLVEIIDPETGEPVPEGEIGELVLTTLDRE--PLIRYRTRDLTRIKCPCGRTHLRIDRIKGRSDD-FIIKGVNIFP-QVEKILVQFPELGSNYLITLETVNNQDE-IVEVELSDLSTDN-YIELEKIRRDIIRQLKDEILVTPKVKLVKKGSLP-------RVKDLRDN---
7	SP3	2y27a	0.634	0.950	6.885	threading_7	------LEPIETASRDELTALQLERLKWSLRHAYDHSPVYRRKFDEAGVHPDDLKTLADLSRFPFTTKGDLRDSYPFG-FAVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGGGQTEKQVQLIQDFRPDII-VTPSY-LSIADEIERQ-GLDPVQSSLRIGIFGAEPWTN-DRVAIEQ-RGIDAVDIYGLSEV-GPGVASECVETKDGPTIWEDHFYPEIIDPETGEVLPDGELGELVFTSLTKEALPIIRYRTRDLTRLLP--GTARTRREKITGRSDDI--VRGVNVFPTQIEEQLLKQRALAPHYQIVLTKEGPLDVLTLNVEPCPETAPD-TAAIQVAKQALAYDIKSLIGVTAVINVLPVNGIERSVGKARRVVDKRK----
8	SAM-T99	2y4oA	0.666	0.986	7.719	threading_8	-HPAAALEPIETASRDELQALQLERLKWSLRHAYDNVPHYRRTFDAAGVHPDDLKSLADLAKFPFSTKNDLRDNYPFGLFAVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQ-GMDPAESSLKIGIFGAEPWTQALRNEVETRVGIDALDIYGLSEVMGPGVACECVETKDGPVIWEDHFYPEIIDPVTGEVLPDGSQGELVFTSLTKEAMPVIRYRTRDLTALLPPTARAMRRLAKITGRSDDMLIVRGVNVFPSQIEEIVVALPLLSGQFQITLSRDGHMDRLDLAVELRSEAAASVTDERAALARELQHRIKTMVGVSSGVTVLAAGGIPATAGKARRVIDRRQ----
9	MUSTER	3qovA	0.430	0.936	3.094	threading_9	-GSTQYWEEEIEISREKLQELQLQRLKKTINIAAN-SPYYKEVFSKNGITGDSIQSLDDIRKIPFTTKSD-RANYPFGLVAGDKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYV-GIRKTDVFQNSSGYG-FTGGLGFQYGAERLGCLTVPAAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEE-GIDPRETTLKTLVIGAEPHTDEQRRKIER--NVKAYNSFGTEN--GPGVAFECQE-QNG-HFWEDCYLVEIIDPETGEPVPEGEIGELVLTTLDRE--PLIRYRTRDLTRILCPCGRTHLRIDRIKGRSDD-FIIKGVNIFP-QVEKILVQFPELGSNYLITLETVNNQ-DEIVEVELSDL-STDNYIELEKIRRDIIRQLKDEILVTPKVKLVKKGSLPR-------VKDLRDN---
10	SPARKS	3s89a	0.430	0.952	6.334	threading_10	-GSTQYWEEEIEISREKLQELQLQRLKKTINIAA-NSPYYKEVFSKNGITGDSIQSLDDIRKIPFTTKSDRAN-YPFGLVAGDKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCL-YVGIRKTDVFQNSSGYG-FTGGLGFQYGAERLGCLTVPAAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQE-EGIDPRETTLKTLVIGAEPHTDEQRRKIER-LNVKAYNSFGTEN--GPGVAFECQE--QNGHFWEDCYLVEIIDPETGEPVPEGEIGELVLTTLDRE--PLIRYRTRDLTRILCPCGRTHLRIDRIKGRSDDFII-KGVNIFP-QVEKILVQFPELGSNYLITLETVNN-QDEIVEVELSDL-STDNYIELEKIRRDIIRQLKDEILVTPKVKLVKKGSLPQSEGKAVRVKDLRD----

Predicted Tertiary Structure


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TM-score=0.599 to 1pg3B SCOP code=e.23.1.1	TM-score=0.599 to 1pg3B SCOP code=e.23.1.1	TM-score=0.601 to 1mdfA SCOP code=e.23.1.1	TM-score=0.599 to 1pg3B SCOP code=e.23.1.1	TM-score=0.599 to 1pg3B SCOP code=e.23.1.1