Template-based Modeling Results for OPPB_ECOLI

Submitted Primary Sequence

>Length 306
MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY
212100210110000000000000000300210112033301230012003314021000100010011002011010022332201200131011003200111011111010000000144222111001000100100010000000000001203101001111100100000000000000000010000100310212001003122032110001000300000000000000000000000001000020001000100132111001000000000000010000000101113243
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY
1	MUSTER	2onkC	0.186	0.791	0.998	threading_1	------MRLLFSALLALLSSIILLFVLL--PVAATVTLQLFN-----------------FDEFLKAASD------------------PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKS-FPGKSVVEGIVDLPVVIPHTVAGIALLVVFG---GLI--GSFSPLKF-ALPGIVVAMLFVSVPIYINQAKEGFASV-DVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISGAVVV--IAYYPMIAPTLIYERYL-GLS----AAMPVAAILILLSLAVFVALRII------
2	SPARKS	3dhwa	0.179	0.641	1.359	threading_2	--------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRNAKLYRTVSAIVNIFRSIP-----FIILLVWMIPF--TRVIVGTSIG---LQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAV-GAGGLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGD------------
3	PROSPECT2	1ejlI	0.102	0.997	1.541	threading_3	IVKGIQLQATQAARKLLIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLPEVLADSCWAISMVVKKGVVPLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPKTNIQKEATWTMAGRQDQIQQVVNHGLVPFLKEAAWAITNYTGTVEQIVYLVHCGII-EPLMNLLSAKDTKIIQVILDAISNIFQAAEKLSIMIEECGNESVYK
4	PPA-I	3dhwA	0.189	0.641	3.838	threading_4	--------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVIANAKLYRTVSAIVNIFRSIP-FIILLVWMIPFTRVIVGTSIG---------LQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMG-GAVGAGGLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGD------------
5	HHPRED-l	3tui_A	0.167	0.683	4.934	threading_5	---------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTS-------I---GLQAAIVPLTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGG-AVGAGGLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR----
6	HHPRED-g	3tui_A	0.177	0.683	4.829	threading_6	---------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVG------TS-IGLQAAIVP---LTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGG-AVGAGGLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR----
7	SP3	2r6gg	0.142	0.853	1.648	threading_7	KARLFITHLLLLLFIAAIFPLLMVVAISLRQGN--FATGSLIP------------EQISWDHWKLALG---FSVITPP----PFP----VLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPG-KATLLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLN--THGGVIFAYLG----GIALHVWTIKGYFET-IDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAPVASLLLVNSYTLAGMQQYL--NPQNYLWGDFAAAAVMSALPITIVFLLA----------QRW
8	SAM-T99	1c7oA	0.152	0.732	0.662	threading_8	MIYKISRKNLGSLKWDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKK--------------YLDETVLGYTGPTEEYK-----KTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYY---PFFMAIKNQERKIIECELLEKDGYYTIDFIKAPLIEGTYLQWIDFRALKMDHKAMEEFM-----------------------------------------------------------IHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALK-
9	MUSTER	3d31C	0.192	0.781	0.937	threading_9	----------PLTFVFSFLLLVLFLFIFL----TLS------NMIFEQITEDFS----GLVKAAG----------------------RSVISSIFLSLYAGFLATLLALLLGAPTGYILARFD-FPGKRLVESIIDVPVVVPHTVAGIALLTVFG---GLI--GEPLESYIQALPGIVVAMLFVSMPYLANSAREGFKSV-DPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISGAVVI--LAYYPMGPTLIYDRFISYGLS----ASRPIAVLLILVTLSIFLVIR--------
10	SPARKS	3d31c	0.184	0.797	1.279	threading_10	----------PLTFVFSFLLLVLFLFIFLTLSNMIFEQITEDFSGLVKAAG-----------------------------------NRSVISSIFLSLYAGFLATLLALLLGAPTGYILA-RFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGLIGEPLESYIQFRDALPGIVVAMLFVSM---PYLANSAREGFKS-VDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILYYPMVGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIR------------

Predicted Tertiary Structure


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TM-score=0.808 to 2onkC SCOP code=f.58.1.1	TM-score=0.746 to 1t5jA SCOP code=a.209.1.1	TM-score=0.785 to 3dhwA SCOP code=f.58.1.1	TM-score=0.761 to 1ialA SCOP code=a.118.1.1	TM-score=0.772 to 3dhwA SCOP code=f.58.1.1