Template-based Modeling Results for OMPF_ECOLI

Submitted Primary Sequence

>Length 362
MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQF
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQF
42121000000000000000100211333212010100000001013232332222313221000002022203220200000001011322322323211201000000213200101001010000000000111121101111111111121100010112211111100000001102233322332212000000002131100000000022222232322131220100000020102101000000102111212231232201002010000001010121010000001021232322232210100000000101410100010100213233422222311000000021
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQF
1	MUSTER	1hxuA	0.994	0.939	3.048	threading_1	----------------------AEIYNKDGNKVDLYGKAKGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVKRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQF
2	SPARKS	1hxxa	0.997	0.939	9.402	threading_2	----------------------AEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVFDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQF
3	PROSPECT2	3nsgA	0.548	0.912	3.954	threading_3	-----------------------EIYNKDGNKLDLYGKAVGRHVWTTTGDSKN----ADQTYAQIGFKGETQINTDLTGFGQWEYRTKADRAEG-EQQNSNLVRLAFAGLKYAEVGSIDYGRNYGIVYDVESYTDAPYFSGETWGGATDNYTSRAGGLLTYRNSDFFGLVDGLSFGIQYQGKNQDNHSINSQNGDGVGYTAYEFDGFGVTAAYSNSKRTNDQ-QDRDGNGDRAESRAVGAKYDANNVYLAAVYAETRNSIVENT--VTDTVEANKTQNLEVVAQYQFDFGLRPAISYVQSKGKQLNGAGGSDLAKYIQAGATYYFNKNN-VWVDYRFNLLDENDSSYVGTDDQAAVGITYQF
4	PPA-I	1hxuA	0.994	0.939	3.561	threading_4	----------------------AEIYNKDGNKVDLYGKAKGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVKRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQF
5	HHPRED-l	2zfg_A	0.964	0.923	5.512	threading_5	----------------------AEIYNKDGNKVDLYGKAVGLHYFSKG-GENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFDGLNFAVQYLGKNE----RDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQ-
6	HHPRED-g	1pho_A	0.642	0.903	5.511	threading_6	----------------------AEIYNKDGNKLDVYGKVKAMHYMSDNASKD-----GDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTA--QQKTRLAFAGLKYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSQTDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGDFAISGAYTNSDRTNEQNLQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITG------GFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF
7	SP3	1hxxa	0.997	0.939	8.234	threading_7	----------------------AEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVFDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQF
8	SAM-T99	1hxuA	0.994	0.939	6.303	threading_8	----------------------AEIYNKDGNKVDLYGKAKGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVKRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQF
9	MUSTER	1phoA	0.639	0.903	2.785	threading_9	----------------------AEIYNKDGNKLDVYGKVKAMHYMSDNAS-----KDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAE--SDTAQQKTRLAFAGLKYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGDFAISGAYTNSDRTNEQNLQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPIT------GGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF
10	SPARKS	1e54a	0.183	0.845	5.818	threading_10	------------------------------SSVTLFGIVDTNVAYVNKDAAGDSLGTSGASTSRLGLRGTEDLGGGLKAGFWLEGEIFGDDGN---ASGFNFKRRSTVSLS-GNFGEVRLGRDLVPTSQKLTSYDLFSATGIGPFMGADDNGIRANNLISYYTPNFGGFNAGFGYAF---DEKQTIGTADSVGRYIGGYVAYDNGPLSASLGLAQQKTAVG------GLATDRDEITLGASYNFGVAKLSGLLQQTKFKRDIGG--------DIKTNSYMLGASAPVGGVGEVKLQYALYDQKAIDS-----KAHQITLGYVHNLSKRTALYGNLAFLKNKDASTLGLQAKGGVQVGIRHAF

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.968 to 1hxuA TM-score=0.995 to native SCOP code=f.4.3.1	TM-score=0.968 to 1hxuA TM-score=0.995 to native SCOP code=f.4.3.1	TM-score=0.966 to 1hxuA TM-score=0.996 to native SCOP code=f.4.3.1	TM-score=0.901 to 1hxuA TM-score=0.928 to native SCOP code=f.4.3.1	TM-score=0.968 to 1hxuA TM-score=0.995 to native SCOP code=f.4.3.1

Experimental Structure

Download 1opfA

SCOP code=f.4.3.1