Template-based Modeling Results for OBG_ECOLI

Submitted Primary Sequence

>Length 390
MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR
CCCEEEEEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHHCCCCHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR
332100000101003213100001123112310121021030000001014202200112122002043132122421213403101020020020012221100010133112000021122110102031221301322241231221200010000010000002221302001000202030021200121100000202322100001010003001311110120021022020000000012131220121021012002401331232110000020212332201310220043123332001000121210320011002003423223233243333131223333433211024333321122122323300211254
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR
1	MUSTER	1udxA	0.407	0.969	3.246	threading_1	M-FQDVLVITVAAGRGGDGAVSFRREKFVPKGGPDGGDGGRGGSVYLRARGSVDSLSRLSK-RTYKAEDGEHGRGSQQHGRGGEDLVIEVPRGTRVFDADTGELLADLTEEGQTVLVARGGAGGRGNMHFVSPTRQAPRFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTRVLLYVLDAAD----EPLKTLETLRKEVGAYDPALLRRPSLVALNKVDLLEEEAVKALADALARE---GLAVLPVSALTGAGLPALKEALHALVRSTPPPEMPKPVPQAGVEVVPV---AEGVYEVRAPEVERYLARIKGDLMEAAGYLQEV
2	SPARKS	1udxa	0.407	0.969	5.354	threading_2	M-FQDVLVITVAAGRGGDGAVSFRREKFVPKGGPDGGDGGRGGSVYLRARGSVDSLSRLSKRT-YKAEDGEHGRGSQQHGRGGEDLVIEVPRGTRVFDADTGELLADLTEEGQTVLVARGGAGGRGNMHFVSPTRQAPRFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTRVLLYVLDAA----DEPLKTLETLRKEVGAYDPALLRRPSLVALNKVDLLEEEAVKALADALARE---GLAVLPVSALTGAGLPALKEALHALVRSTPPPEMPKPVPQAGVEVVPV---AEGVYEVRAPEVERYLARIKGDLMEAAGYLQEV
3	PROSPECT2	1udxA	0.407	0.969	5.489	threading_3	M-FQDVLVITVAAGRGGDGAVSFRREKFVPKGGPDGGDGGRGGSVYLRARGSVDSLSRLSKRT-YKAEDGEHGRGSQQHGRGGEDLVIEVPRGTRVFDADTGELLADLTEEGQTVLVARGGAGGRGNMHFVSPTRQAPRFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTRVLLYVLDAAD----EPLKTLETLRKEVGAYDPALLRRPSLVALNKVDLLEEEAVKALADALA---REGLAVLPVSALTGAGLPALKEALHALVRSTPPPEMPKPVPQAGVEVVPV---AEGVYEVRAPEVERYLARIKGDLMEAAGYLQEV
4	PPA-I	1lnzA	0.482	0.851	6.078	threading_4	--FVDQVKVYVKGGDGGNG-VAFRREKYVPKGGPAGGDGGKGGDVVFEVDEGLRTL-DFRYKKHFKAIRGEHG-SKNQHGRNADD-VIKVPPGTVVTDDDTKQVIADLTEHGQRAVIARGGRGGRGNSRFATPANPAPQLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGVETDDGR--SFVADLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVID-SGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANKDP-----EAAENLEAFKEKLTDDYPVFPISAVTREGLRELLFEVANQLENTPEFPLYDEEEL--------------------------------------------
5	HHPRED-l	1udx_A	0.402	0.964	5.443	threading_5	-MFQDVLVITVAAGRGGDGAVSFRREKFVPKGGPDGGDGGRGGSVYLRARGSVDSLSRLS-KRTYKAEDGEHGRGSQQHGRGGEDLVIEVPRGTRVFDADTGELLADLTEEGQTVLVARGGAGGRGNMHFVSPTRQAPRFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTRVLLYVLDAA----DEPLKTLETLRKEVGAYDPALLRRPSLVALNKVDLLEEEAVKALADALAR---EGLAVLPVSALTGAGLPALKEALHALVRSTPPPEMPKVP----QAGVEVVPVAEGVYEVRAPEVERYLARIKGDLMEAAGYLQE-
6	HHPRED-g	1udx_A	0.398	0.967	5.874	threading_6	-MFQDVLVITVAAGRGGDGAVSFRREKFVPKGGPDGGDGGRGGSVYLRARGSVDSLSRLS-KRTYKAEDGEHGRGSQQHGRGGEDLVIEVPRGTRVFDADTGELLADLTEEGQTVLVARGGAGGRGNMHFVSPTRQAPRFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTRVLLYVLDAA----DEPLKTLETLRKEVGAYDPALLRRPSLVALNKVDLLEEE-AVKALADALAREGL--AVLPVSALTGAGLPALKEALHALVRSTPPPEMPKPVP----AGVEVVPVAEGVYEVRAPEVERYLARIKGDLMEAAGYLQEV
7	SP3	1udxa	0.407	0.969	5.414	threading_7	M-FQDVLVITVAAGRGGDGAVSFRREKFVPKGGPDGGDGGRGGSVYLRARGSVDSLSRLSK-RTYKAEDGEHGRGSQQHGRGGEDLVIEVPRGTRVFDADTGELLADLTEEGQTVLVARGGAGGRGNMHFVSPTRQAPRFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTRVLLYVLDAA----DEPLKTLETLRKEVGAYDPALLRRPSLVALNKVDLLE-EEAVKALADALAREGL--AVLPVSALTGAGLPALKEALHALVRSTPPPEMPKPVPQAGVEVVPV---AEGVYEVRAPEVERYLARIKGDLMEAAGYLQEV
8	SAM-T99	1lnzA	0.488	0.851	7.239	threading_8	--FVDQVKVYVKGGDGGNG-VAFRREKYVPKGGPAGGDGGKGGDVVFEVDEGLRTL-DFRYKKHFKAIRGEHG-SKNQHGRNADD-VIKVPPGTVVTDDDTKQVIADLTEHGQRAVIARGGRGGRGNSRFATPANPAPQLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLG-VETDDGRSFV-ADLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVID-SGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANK-----DPEAAENLEAFKEKLTDDYPVFPISAVTREGLRELLFEVANQLENTPEFPLYDEEEL--------------------------------------------
9	MUSTER	1lnzA	0.479	0.851	3.182	threading_9	--FVDQVKVYVKGGDGGNG-VAFRREKYVPKGGPAGGDGGKGGDVVFEVDEGLRTL-DFRYKKHFKAIRGEHG-SKNQHGRNADD-VIKVPPGTVVTDDDTKQVIADLTEHGQRAVIARGGRGGRGNSRFATPANPAPQLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGVET--DDGRSFVADLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVID-SGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANKDP-----EAAENLEAFKEKLTDDYPVFPISAVTREGLRELLFEVANQLENTPEFPLYDEEEL--------------------------------------------
10	SPARKS	1lnza	0.482	0.851	5.269	threading_10	--FVDQVKVYVKGGDGGNG-VAFRREKYVPKGGPAGGDGGKGGDVVFEVDEGLRTL-DFRYKKHFKAIRGEHG-SKNQHGRNADD-VIKVPPGTVVTDDDTKQVIADLTEHGQRAVIARGGRGGRGNSRFATPANPAPQLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGVE-TDDGRSFVA-DLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVID-SGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANKDPE-----AAENLEAFKEKLTDDYPVFPISAVTREGLRELLFEVANQLENTPEFPLYDEEEL--------------------------------------------

Predicted Tertiary Structure


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TM-score=0.756 to 1udxA SCOP code=b.117.1.1	TM-score=0.758 to 1udxA SCOP code=b.117.1.1	TM-score=0.778 to 1udxA SCOP code=b.117.1.1	TM-score=0.795 to 1udxA SCOP code=b.117.1.1	TM-score=0.916 to 1lnzA SCOP code=b.117.1.1