Template-based Modeling Results for NUOH_ECOLI

Submitted Primary Sequence

>Length 325
MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ
5521023012000100200000000000000000011101001212202131010000100010020002222113212211000000000001000111011112110010000000000000000000001001210110000001000200010000000000000001101011011011100000000000000000000202211121231120002112010000100000000000000000000000000110100220010001000000000001000120200000000000000000000000000111224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ
1	SPARKS	2xwub	0.091	0.911	1.128	threading_1	LPPYAANIVAVSQDVLSQCMWLMQALGFLLS-ALQVEEILKNLHS-----LISPYSNKLAIVHILGLLSNTTLDISHPNPVVVVLQQVFQLIQKVLSKW----LNDAQVVEKTLLDDFAPMVPQLCEMLGRMY--STIPQASALDLTRQLVHIFAHEPAHFPPIEALFLLVTSVTLTLFQQGPRD----HPDIVDSFMQLLAQALKRKPDLFLCERLDVKAVF---------QCAVLALKAPTVKASCGFFTELLPRCGEV----ESVGKVVQERMLLIAVLEAIGGQASRSLMDCFADILFALNKFSLLSMWIKEALQPPGFPS
2	PROSPECT2	3a6pA1	0.077	1.000	1.616	threading_2	AMDQVNALCEQLVKAVTVMMAIVRHFGLQILEHVVKFSVMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHWQGETQTELVMFILLRLAEDVVTFQTLPPQRRTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNMSHITKLLEILCLLLNEQELQLGAAECEDRKPLMVLFGDVAMHYILSAAQTADGGGLVLGNQLCALLGADSDVETPSNFGKYLESFLAFTLRSSTQMTWGALFRHEILSRDPLLLAIIPKYLRASMTNLVKMGFPSKTDSPSCEYSFNSSRAQQGEVMRLACRLYQLSTF
3	PPA-I	3zuxA	0.142	0.825	1.216	threading_3	-----NILSKISSFIGKTFSLWAALFAAAAFFA---------------PDTFKWAGPYIPWLLGIIMFGM-GLTLKPSDFDILFKHPKVVIIGVIAQFAIMPLSKLLNLPAEIAVGVILVGCCPGGTASNVMTYLARGN-----VALSVAVTSVSTLTSPLLTPAIFLMLAGEM-LEIQAAGMLMSIVKMVLLPIVLGLIVHKVLG----------SKTEKLT------DALPLVSVAAIVLIIGAVVGASKGKIM----ESGLLIFAVVVLHNGIGYLLGFFAAKWTGLP----------YDAQKALTIEVGMQNSGLAAALAA
4	SPARKS	2x19b	0.108	0.908	1.034	threading_4	QPDKVPEIQYFGASALHIKISRYWSDIPTDQYESLKAQLFTQITRFAS----GSKIVLTRLCVALASLALSPDAPCAVALFQAGQGRCLALLELLTVLPEEFQTSRLTSLAVECGAVFPLLEQLLQ--------QPSSPSCVRQKVLKCFSSWVQLEVPLQEALIQAAFAALQDSIVNAISAQRYVNTLLKLIPLVL-GLQEQLRQ-------AVQNGDETSHGI------CRIAVALGENHSRALLVEHWQSFLALIPGHYPVNETTSSLTLTFWYTLQDDI---LSFEAEKQAVYQQVY-RPVYFQLVDVLLHKAQFPSDEEY
5	PROSPECT2	1ezfa	0.065	0.902	1.458	threading_5	NSL--KTCYKYLNQTSRSFAAVIQMRNAVCIFYLVLRALDTLEDDMTIS-----VEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAE----------KYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYV------AGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGGREFWRYVKKLGDFAKPENID--LAVQCLNELITNALHHIPDVITYLSRLRN-------QSVFNFCAIPQVMAIATLAAVKIDATNMPAVKAIIYQYMEEIYHSSKTRQIISTIRTQN
6	SPARKS	3m1ic	0.128	0.917	1.004	threading_6	TLLLDSETVKIIANIIKTNVAVCTSM-GADFYPQLGHIYYNMLQLYRQVAAEGLIATKTPKVRGLRTIKKEILKSKARNLVVKVLVEPLLNAV-LEDYMNNV-PDARDAEVLNCMTTVVEKVGHMI----------PQGVILILQSFECTLDMINPEHRVEFYKLLKVINEKSFAFLELPPAAFKLFVDAICWAFK---------HNNRDVEVNGQIALDLVK--NIERMGNPFANEFHKNYFFIFVSETFFVLT--DSDHKSGFSKQALLLMKLISLVSVPLYQEAEVPQYLSQYLANMLSNAF-PLTSEQIASFLSALTKQYK
7	PROSPECT2	3a0oA3	0.093	0.862	1.448	threading_7	RLWLNSEQLSAFADAVAKDPNHC------GWAEFYEKSVEPWLERPVMPEPQPYPNNTRVATLWRQMYID----------CQEVIYAIRHLAIALLAVAAWDTKGATSRAYNDEAGFRVVVALAW-GYDWLYDHLSEDERRTVRSVLLERTREVAVRSLSAVLTPACIALQGES----------------DEAGEWLDYTVEFLATLYSPWAGTDGG-----------WAEGPHYWMTGMAYL-IEAANLIRSYIGYDLYQRPFFQNTGRFPLYTLKLGYNVRQFAGVTGNGHYQWYFDHIKADYNYGWWDLNFDDLVYRHDYPQ
8	PROSPECT2	1ejlI	0.121	0.966	1.435	threading_8	VNWSVEDIVKGILQATQAARKLLSIPKFVSFLPIQFESAWALTNIASGTKAVVDGGAIPAFSAFRDLVIKHGAIDPLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVVLADSCWAISYLTDGPNERIEMVGVVPQLVKLLGALPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLTNIQKEATWTMSN-------ITAGRQDQIQQV-VNHGLVPFLVGVLSKADFKTQKEAAWAITNY---TSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVDAISNIFQAATEKLSIMIEECGGLDKIEAS
9	PROSPECT2	1gw5b	0.111	1.000	1.407	threading_9	SKYFTFELKAELKEAVKKVIAALKKLVYLYLMNYAKPDMASFVKDCEDPNCIRVDKITEYLCEPLRKCLKDEHDINAQMVEDQGFLDSLRANAVAALSEISESHPNSNLLDLNPQNINKLLTAGQIFILDCLSNYNPKDDREAQSICERVNSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLPEVQYVALRNINLIVQKRPEILKATEVDVDFVRIGRCAIKVEQSAERCVSTLLDLIAIVVIRDIFRKYPNKYESIIATLCENLDDARAAMIWIVGEYAERIDNADELLESFLEGFESTQVQLTLLTAIVKLFLKK
10	MUSTER	3zuxA	0.152	0.809	0.711	threading_10	-----NILSKISSFIGKTFSLWAALFAAAAFFA---------------PDTFKWAGPYIPWLLGIIMFG-SDFHPIIGVIAQFAIMPATAWCLSKLL---LP--------EIAVGVILVGCCPG-GTASNVMTYLAGN------VALSVAVTSVSTLTSPLLTPAIFLMLAGEM-LEIQAAGMLMSIVKMVLLPIVLGLIVHKVL-----------SKTEKLTDA------LPLVSVAAIVLIIGAVVGASKGKIM----ESGLLIFAVVVLHNGIGYLLGFFAAKWTLPYQNSGLAAALAAAHFVPGALFSVWHNISGSLL-AT

Predicted Tertiary Structure


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TM-score=0.653 to 1xqrA SCOP code=a.118.1.21	TM-score=0.564 to 1xqrA SCOP code=a.118.1.21	TM-score=0.425 to 2q7nB SCOP code=a.26.1.1	TM-score=0.621 to 1qgkA SCOP code=a.118.1.1	TM-score=0.865 to 1ezfB SCOP code=a.128.1.2