Template-based Modeling Results for NRFB_ECOLI

Submitted Primary Sequence

>Length 188
MSVLRSLLTAGVLASGLLWSLNGITATPAAQASDDRYEVTQQRNPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLKEQP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVLRSLLTAGVLASGLLWSLNGITATPAAQASDDRYEVTQQRNPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLKEQP
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCCCHHHHHCHHHHHCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVLRSLLTAGVLASGLLWSLNGITATPAAQASDDRYEVTQQRNPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLKEQP
44102010000000000000010122232232233312223343232000200433232130321212233242211022010312221432232212123222321211200220222331232112221212300012012012332213202342312001201122243332211222224428
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSVLRSLLTAGVLASGLLWSLNGITATPAAQASDDRYEVTQQRNPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLKEQP
1	MUSTER	2p0bA	1.000	0.755	3.024	threading_1	-------------------------------------------NPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLK---
2	SPARKS	2ozya	1.000	0.755	4.088	threading_2	-------------------------------------------NPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLK---
3	PROSPECT2	2ozyA	1.000	0.755	2.517	threading_3	-------------------------------------------NPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLK---
4	PPA-I	2p0bA	1.000	0.755	3.786	threading_4	-------------------------------------------NPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLK---
5	HHPRED-l	2ozy_A	0.979	0.750	4.019	threading_5	-------------------------------------------NPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSQHR-EGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLK---
6	HHPRED-g	2ozy_A	0.878	0.739	3.764	threading_6	-------------------------------------------NPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSQHREGV-KDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDTNPNFNP-ASVPLLK----
7	SP3	2ozya	1.000	0.755	3.664	threading_7	-------------------------------------------NPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLK---
8	SAM-T99	2p0bA	1.000	0.755	3.274	threading_8	-------------------------------------------NPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLK---
9	MUSTER	1ft5A	0.146	0.947	1.219	threading_9	EGRKKCSSCHKAQAQSWKDTAHAKAMESLKPNVKKKLDPAKDYTQDKDCVGCHVDGFGQKGGYTIESPKPML-TGVGCESCHGPGRNFRGDHRKSGQAFEKSGKKDFHFEERCSACHLNYE-GSPWKGAKAPYTPFTPEVDAKYTFKFDEMVKEVKAEHYKL-FKFHDEFQAS------AKPAKKGK-
10	SPARKS	2j7ac	0.180	0.681	1.220	threading_10	-KLVLGGATLGVVALATVAFGMKYTDQR------------------PFCTSCHIMNPVG------VTHKLSGHANISCNDCHAPHNLLAKTLGHPGDLILAGMETKEVVNANCKACHT-----MTNVEVASMEAKKYCTDCHVQHMRMKPISTREVAD------------------------------

Predicted Tertiary Structure


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TM-score=0.419 to 1m1rA TM-score=0.996 to native SCOP code=a.138.1.3	TM-score=0.419 to 1m1rA TM-score=0.996 to native SCOP code=a.138.1.3	TM-score=0.417 to 1m1rA TM-score=0.997 to native SCOP code=a.138.1.3	TM-score=0.417 to 1m1rA TM-score=0.997 to native SCOP code=a.138.1.3	TM-score=0.419 to 1m1rA TM-score=0.996 to native SCOP code=a.138.1.3

Experimental Structure

Download 2ozyA

SCOP code=a.138.1.3