Template-based Modeling Results for NRDG_ECOLI

Submitted Primary Sequence

>Length 154
MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSGQPFTKAMEDQIINDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIWVWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSGQPFTKAMEDQIINDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIWVWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR
CEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEECHHHHHCCCCCCCCCCCCCEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSGQPFTKAMEDQIINDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIWVWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR
2101100201002031000000011011203000121114132122113100110020023122322000000121122320310030022013302131000011121320120012103101000003102323232122212211100214
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSGQPFTKAMEDQIINDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIWVWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR
1	MUSTER	3c8fA	0.203	0.961	2.242	threading_1	VRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTEDLMKEVVTYRHFMNASGGGVTASGGEAIL--QAEFVRDWFRACKKE-GIHTCLDTNGFV-RRYDPVIDELLEVTDVMLDLKQMNDEIHQNL--VGVSNHRTLEAK
2	SPARKS	3c8fa	0.203	0.961	2.750	threading_2	GRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMASGGGVTASGGEAIL--QAEFVRDWFRACKKEGI-HTCLDTNGFVRRY-DPVIDELLEVTLVMLDLKQMNDEIHQNL--VGVSNHRTLEAK
3	PROSPECT2	3c8fA1	0.179	0.799	2.307	threading_3	GRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDMKEVVTYRHFMNASGGGVTASGGEAILQ--AEFVRDWFRACKKE-GIHTCLDTNGFVRRY-DPVIDELLEVTDLVM---------------------------
4	PPA-I	3c8fA1	0.179	0.799	2.808	threading_4	GRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVTYRHFMNASGGGVTASGGEAILQ--AEFVRDWFRACKKE-GIHTCLDTNGFVRRY-DPVIDELLEVTDLVM---------------------------
5	HHPRED-l	3c8f_A	0.197	0.955	5.492	threading_5	GRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTRHFMNASGGGVTASGGEAILQ--AEFVRDWFRACKKEGIH-TCLDTNGFVRRYD-PVIDELLEVTDVMLDLKQMNDE--IHQNLVGVSNHRTLEF-
6	HHPRED-g	3c8f_A	0.181	0.968	4.390	threading_6	GRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFNASGGGVTASGGEAIL--QAEFVRDWFRACKKEGI-HTCLDTNGFVRRYD-PVIDELLEVTDL-VMLDLKQMNDEIHQNLVGVSNHRTLEFA
7	SP3	3c8fa	0.196	0.961	2.885	threading_7	VRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMASGGGVTASGGEAIL--QAEFVRDWFRACKKEGI-HTCLDTNGFVRRYD-PVIDELLEVTLVMLDLKQMNDEIH--QNLVGVSNHRTLEAK
8	SAM-T99	3c8fA	0.189	0.961	5.277	threading_8	GRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNAGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGF----VRRYDPVIDELLEVTDVMLDLKQMNDEI--HQNLVGVSNHRTLEFA
9	MUSTER	3c8fA1	0.179	0.799	2.022	threading_9	VRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTEDLMKEVVTYRHFMNASGGGVTASGGEAILQ--AEFVRDWFRACKKE-GIHTCLDTNGFV-RRYDPVIDELLEVTDLVM---------------------------
10	SPARKS	2a5ha	0.209	0.903	0.967	threading_10	LHEDTDSPV-----PGLRVLLLITDCSY-CRHCTRR---RFAGQSDDSPERIDKAIDYIRNTP-QVRDVLLSGGDALL-VSDETLEYIIAKLREIPHVEIVRIGSRVLPQRITPELVNLKKYHPVWLNTRACQLLADAGVPLG---NQSVL-LR

Predicted Tertiary Structure


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TM-score=0.531 to 1vc1A SCOP code=c.13.2.1	TM-score=0.536 to 1vc1A SCOP code=c.13.2.1	TM-score=0.561 to 1vc1A SCOP code=c.13.2.1	TM-score=0.549 to 1vc1A SCOP code=c.13.2.1	TM-score=0.536 to 1vc1A SCOP code=c.13.2.1