Template-based Modeling Results for NMPC_ECOLI

Submitted Primary Sequence

>Length 365
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTQRATGVATYRNNDFFGLVDGLNFAAQYQGKNDRSDFDNYTEGNGDGFGFSATYEYEGFGIGATYAKSDRTDTQVNAGKVLPEVFASGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFADHFVANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKDLGVWGDQDLVKYVDVGATYYFNKNMSTFVDYKINLLDKNDFTKALGVSTDDIVAVGLVYQF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTQRATGVATYRNNDFFGLVDGLNFAAQYQGKNDRSDFDNYTEGNGDGFGFSATYEYEGFGIGATYAKSDRTDTQVNAGKVLPEVFASGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFADHFVANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKDLGVWGDQDLVKYVDVGATYYFNKNMSTFVDYKINLLDKNDFTKALGVSTDDIVAVGLVYQF
CCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCEEEEEEEEEEEEECCCCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTQRATGVATYRNNDFFGLVDGLNFAAQYQGKNDRSDFDNYTEGNGDGFGFSATYEYEGFGIGATYAKSDRTDTQVNAGKVLPEVFASGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFADHFVANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKDLGVWGDQDLVKYVDVGATYYFNKNMSTFVDYKINLLDKNDFTKALGVSTDDIVAVGLVYQF
43120100000000000000110010123331201010101010101233233232220100020111023301000101010213323242223220000000021221000100211000000000010112110101111211122212000101012210101001000001032332323322322120000000011211100000011222323222132123112212201000000201022010000001011222123321012010010001010221020000000120232222233110100000000101410100010100113333123222222321000000021
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTQRATGVATYRNNDFFGLVDGLNFAAQYQGKNDRSDFDNYTEGNGDGFGFSATYEYEGFGIGATYAKSDRTDTQVNAGKVLPEVFASGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFADHFVANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKDLGVWGDQDLVKYVDVGATYYFNKNMSTFVDYKINLLDKNDFTKALGVSTDDIVAVGLVYQF
1	MUSTER	1phoA	0.659	0.899	2.742	threading_1	-----------------------AEIYNKDGNKLDVYGKVKAMHYMSDNASKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAE-SDTAQQKTRLAFAGLKYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRDVKKQ---NGDGFGTSLTYDFGDFAISGAYTNSDRTNEQN------LQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPI-TGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDN---KLNINNDDIVAVGMTYQF
2	SPARKS	1hxxa	0.632	0.901	8.503	threading_2	-----------------------AEIYNKDGNKVDLYGKAVGLHYFSKGNGENGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVFDALGYTDMLPEFGGDT-AYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTA---RRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQP------LGNGKKAEQWATGLKYDANNIYLAANYGETRNATPINTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDN---KLGVGSDDTVAVGIVYQF
3	PROSPECT2	3nsgA	0.550	0.901	4.043	threading_3	------------------------EIYNKDGNKLDLYGKAVGRHVWTTTDSKNADQTYAQIGFKGETQINTDLTGFGQWEYRTKADRAEGEQQNSNLVRLAFAGLKYAEVGSIDYGRNYGIVYDVESYTDAPYFSGETWGGAYTDNYTSRAGGLLTYRNSDFFGLVDGLSFGIQYQGKNQDNH--SINSQNGDGVGYTAYEF-DGFGVTAAYSNSKRTNDQQDRD-------GNGDRAESRAVGAKYDANNVYLAAVYAETRNSIVENTVTEANKTQNLEVVAQYQFDFGLRPAISYVQSKGKQLNGAGGSDLAKYIQAGATYYFNKNN-VWVDYRFNLLDENDYSS-SYVGTDDQAAVGITYQF
4	PPA-I	1phoA	0.639	0.904	3.220	threading_4	-----------------------AEIYNKDGNKLDVYGKVKAMHYMSDNASKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAE-SDTAQQKTRLAFAGLKYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRDV-KKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN------LQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGF-ANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDN---KLNINNDDIVAVGMTYQF
5	HHPRED-l	2j1n_A	0.676	0.912	5.676	threading_5	-----------------------AEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSAE--NENNSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYG-SDNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGKNGNPSGRDALRQNGDGVGGSITYDYEGFGIGGAISSSKRTDAQNTA-----AYIGNGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLVYQ-
6	HHPRED-g	2j1n_A	0.677	0.915	5.716	threading_6	-----------------------AEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSAENE--NNSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYG-SDNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGKNGNPNGRDALRQNGDGVGGSITYDYEGFGIGGAISSSKRTDAQNTAA-----YIGNGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLVYQF
7	SP3	1hxxa	0.632	0.901	7.776	threading_7	-----------------------AEIYNKDGNKVDLYGKAVGLHYFSKGNGENGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVFDALGYTDMLPEFGGDTA-YSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTA---RRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQ------PLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDN---KLGVGSDDTVAVGIVYQF
8	SAM-T99	2ixxA	0.674	0.915	6.242	threading_8	-----------------------AEVYNKDGNKLDLYGKVDGLHYFSDDKSVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNAPE--SENNSWTRVAFAGLKFQDIGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGS-DNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGQNGTNNGRKALRQNGDGVGGSITYDYEGFGVGAAVSSSKRTWDQNNTG-----LIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKNLRNYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNQFTRAAGINTDDIVALGLVYQF
9	MUSTER	1hxuA	0.635	0.901	2.666	threading_9	-----------------------AEIYNKDGNKVDLYGKAKGLHYFSNSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGDAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDT-AYSDDFFVKRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARR---SNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQP------LGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDN---KLGVGSDDTVAVGIVYQF
10	SPARKS	1e54a	0.139	0.868	6.294	threading_10	---------------------SSVTLFGIVDTNVAYVNKDAAGD--SRYGLGTSGASTSRLGLRGTEDLGGGLKAGFWLEGEIFGDDG--NASGFNFKRRSTVSLS-GNFGEVRLGRDLVPTSQKLTSYDLFSATGIGPFMGFRNWAAGQGADDNGIRANNLTPNFGGFNAGFGYAFDEKQTIGTA--DSVGRYIGGYVAYDNGPLSASLGLAQQK------------TAVGGLATDRDEITLGASYNFGVAKLSGLLQQTKFKRDIGG---DIKTNSYMLGASAPVGGVGEVKLQYALYDQKAIDS-----KAHQITLGYVHNLSKRTALYGNLAFLKNKDASTLGLQAKGVYAGVQVGIRHAF

Predicted Tertiary Structure


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TM-score=0.941 to 1phoA SCOP code=f.4.3.1	TM-score=0.944 to 1phoA SCOP code=f.4.3.1	TM-score=0.923 to 1hxuA SCOP code=f.4.3.1	TM-score=0.883 to 1phoA SCOP code=f.4.3.1	TM-score=0.946 to 1phoA SCOP code=f.4.3.1