Template-based Modeling Results for NLPC_ECOLI

Submitted Primary Sequence

>Length 154
MRFCLILITALLLAGCSHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRFCLILITALLLAGCSHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHCCCCCEEEEECCCCCCCCEEEEEECCCEEEECCCCCCEEEECCCCHHHHHHCEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRFCLILITALLLAGCSHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI
4210010000000000133322323242232220010002101212111021102043100000000000123141301211310122123133320230000001011243000000000201000011231001011212102420110112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRFCLILITALLLAGCSHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI
1	MUSTER	2k1gA	0.480	0.799	4.277	threading_1	-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRA--GSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV
2	SPARKS	2jyxa	0.488	0.799	4.336	threading_2	-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGST--GRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV
3	PROSPECT2	2jyxA	0.488	0.799	3.044	threading_3	M-----------------------------NVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRA--GSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV
4	PPA-I	2k1gA	0.480	0.799	5.392	threading_4	-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRA--GSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV
5	HHPRED-l	2jyx_A	0.484	0.792	4.818	threading_5	-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAG--STGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARR-
6	HHPRED-g	2jyx_A	0.488	0.799	4.243	threading_6	-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGS--TGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV
7	SP3	2jyxa	0.480	0.799	3.775	threading_7	-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRA--GSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV
8	SAM-T99	2k1gA	0.480	0.799	6.545	threading_8	-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRA--GSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV
9	MUSTER	3h41A2	0.254	0.818	3.900	threading_9	--------------------------SQNDIPTPAADDLINTGKFLGLPYIWAGTSGFGFD-SGFTHTIYKSH-GITIPRDSGPQSRNGVAVDKEHLQKGDLIFFAHDQGKGSVHHVAYIGDGNIHSPRAERSVEIIPLNTPGYIEEYAGARRY
10	SPARKS	2k1ga	0.480	0.799	4.310	threading_10	-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRA--GSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.515 to 2iobB SCOP code=c.30.1.7	TM-score=0.515 to 2iobB SCOP code=c.30.1.7	TM-score=0.516 to 2iobB SCOP code=c.30.1.7	TM-score=0.524 to 2iobB SCOP code=c.30.1.7	TM-score=0.515 to 2iobB SCOP code=c.30.1.7