Template-based Modeling Results for NLPA_ECOLI

Submitted Primary Sequence

>Length 272
MKLTTHHLRTGAALLLAGILLAGCDQSSSDAKHIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLTTHHLRTGAALLLAGILLAGCDQSSSDAKHIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCEEEEEEEEECCEEEECCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCEEEECHHHHHHCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLTTHHLRTGAALLLAGILLAGCDQSSSDAKHIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW
54212111100000000000001033333323201000010113200210132034423020100102112100100331301000110210012113322220000020001200010431320221331110001112111010010023231010232322221121023213302002020210020023330000000010013011122320001234422000000013434323102200400213300300232032020123
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKLTTHHLRTGAALLLAGILLAGCDQSSSDAKHIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW
1	MUSTER	3k2dA	0.549	0.871	3.402	threading_1	--------------------------GHMDTSKVKVGVMAGAEAQVAEVAAKVAKEKYGLDVELVTFTDYVTPNAALDDGSIDMNAFQHKPYLDRQVEDRDYKLTIAGNTFVYPIAGYSKQVKSVAALADGVRIAVPNDPTNLGRSLLLLEQQGLIKLRPEVGLLATVRDIVENPKNITIMELDAAQLPRSLDD--VALSIINTTYASSINLTPEKDGVFVEDKESPYVNLIVARQDNVQNENVQNFVKAYQTEEVYTAAKEIFK-------
2	SPARKS	3k2da	0.549	0.871	6.315	threading_2	--------------------------GHMDTSKVKVGVMAGAEAQVAEVAAKVAKEKYGLDVELVTFTDYVTPNAALDDGSIDMNAFQHKPYLDRQVEDRDYKLTIAGNTFVYPIAGYSKQVKSVAALADGVRIAVPNDPTNLGRSLLLLEQQGLIKLRPEVGLLATVRDIVENPKNITIMELDAAQLPRSLDD--VALSIINTTYASSINLTPEKDGVFVEDKESPYVNLIVARQDNVQNENVQNFVKAYQTEEVYTAAKEIFK-------
3	PROSPECT2	3k2dA	0.549	0.871	5.262	threading_3	--------------------------GHMDTSKVKVGVMAGAEAQVAEVAAKVAKEKYGLDVELVTFTDYVTPNAALDDGSIDMNAFQHKPYLDRQVEDRDYKLTIAGNTFVYPIAGYSKQVKSVAALADGVRIAVPNDPTNLGRSLLLLEQQGLIKLRPEVGLLATVRDIVENPKNITIMELDAAQLPRSLDD--VALSIINTTYASSINLTPEKDGVFVEDKESPYVNLIVARQDNVQNENVQNFVKAYQTEEVYTAAKEIFK-------
4	PPA-I	3k2dA	0.549	0.871	4.754	threading_4	--------------------------GHMDTSKVKVGVMAGAEAQVAEVAAKVAKEKYGLDVELVTFTDYVTPNAALDDGSIDMNAFQHKPYLDRQVEDRDYKLTIAGNTFVYPIAGYSKQVKSVAALADGVRIAVPNDPTNLGRSLLLLEQQGLIKLRPEVGLLATVRDIVENPKNITIMELDAAQLPRSLDD--VALSIINTTYASSINLTPEKDGVFVEDKESPYVNLIVARQDNVQNENVQNFVKAYQTEEVYTAAKEIFK-------
5	HHPRED-l	3gxa_A	0.336	0.864	3.426	threading_5	-------------------------------KEIVFGTTVGDFGDMVEQIQP-ELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKPYLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVMLDELGWIKLKDINPLTASKADIAENLKNIKIVELEAAQLPRSR--ADVDFAVVNGNYAISSGMKLT-EALFQEPSFA-YVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYKSPA-
6	HHPRED-g	1xs5_A	0.351	0.879	5.268	threading_6	-----------------------------KDETVGVGVLSEPHARLLEIAKEEVK-KQHIELRIVEFTNYVALNEAVMRGDILMNFFQHVPHMQQFNQEHNGDLVSVGNVHVEPLALYSRTYRHVSDFPAGAVIAIPNDSSNEARALRLLEAAGFIRMRAGSGLFATVEDVQQNVRNVVLQEVESALLPRVFDQ--VDGAVINGNYAIMAGLSARRDGLAVEPDASAYANVLVVKRGNEADARVQAVLRALCGGRVRTYLKERYKGGVAPA-
7	SP3	3k2da	0.549	0.871	6.580	threading_7	--------------------------GHMDTSKVKVGVMAGAEAQVAEVAAKVAKEKYGLDVELVTFTDYVTPNAALDDGSIDMNAFQHKPYLDRQVEDRDYKLTIAGNTFVYPIAGYSKQVKSVAALADGVRIAVPNDPTNLGRSLLLLEQQGLIKLRPEVGLLATVRDIVENPKNITIMELDAAQLPRSLDD--VALSIINTTYASSINLTPEKDGVFVEDKESPYVNLIVARQDNVQNENVQNFVKAYQTEEVYTAAKEIFK-------
8	SAM-T99	3k2dA	0.549	0.871	5.859	threading_8	--------------------------GHMDTSKVKVGVMAGAEAQVAEVAAKVAKEKYGLDVELVTFTDYVTPNAALDDGSIDMNAFQHKPYLDRQVEDRDYKLTIAGNTFVYPIAGYSKQVKSVAALADGVRIAVPNDPTNLGRSLLLLEQQGLIKLRPEVGLLATVRDIVENPKNITIMELDAAQLPRSLDD--VALSIINTTYASSINLTPEKDGVFVEDKESPYVNLIVARQDNVQNENVQNFVKAYQTEEVYTAAKEIFK-------
9	MUSTER	1xs5A	0.347	0.879	3.197	threading_9	-----------------------------KDETVGVGVLSEPHARLLEIAKEEVKKQ-HIELRIVEFTNYVALNEAVMRGDILMNFFQHVPHMQQFNQEHNGDLVSVGNVHVEPLALYSRTYRHVSDFPAGAVIAIPNDSSNEARALRLLEAAGFIRMRAGSGLFATVEDVQQNVRNVVLQEVESALLPRVFDQ--VDGAVINGNYAIMAGLSARRDGLAVEPDASAYANVLVVKRGNEADARVQAVLRALCGGRVRTYLKERYKGGVAPA-
10	SPARKS	3tqwa	0.454	0.842	5.892	threading_10	---------------------------------VRVGTIAGPETQLEVAKQVALN-RYGLHVNIITFSDYNTPNEALADGSVDANF-QHLPYLKAQI-ERGYKIVSIGKTFVYP-GLYSKKITALTQLKTGAKIAVPSDPSNEARALLLLEKAQLIQLKTHINATP---DIASNPKKLKIVELDAAQLSRSLGD--VDLAAINTNYAIPAGLSPSRDALLTEGPNSPYANVVAVREDDKNDPRLKQLVSALHSPAVLSAAKKIFGDGAIPA-

Predicted Tertiary Structure


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TM-score=0.873 to 1xs5A SCOP code=c.94.1.1	TM-score=0.873 to 1xs5A SCOP code=c.94.1.1	TM-score=0.873 to 1xs5A SCOP code=c.94.1.1	TM-score=0.873 to 1xs5A SCOP code=c.94.1.1	TM-score=0.873 to 1xs5A SCOP code=c.94.1.1