Template-based Modeling Results for NIRC_ECOLI


  Submitted Primary Sequence

>Length 268
MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMWAILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAAG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMWAILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAAG
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMWAILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAAG
4332002201210130121122210000000000000000000000001211221011000000000000000000010020100000000211202002000000000001000000000001100111221001001000112111200100010000000000000001313200100000000000000002100000000000101111300000000000000000100000000000000012323332233232232224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMWAILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAAG
1MUSTER3kcuA0.2790.8542.938threading_1---------------------KHPLKTFYLAITAGVFISIAFVFYITATTGMPFGMAKLVGGICFSLGLILCVVCGADLFTS-TVLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTAQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLR-----------------
2SPARKS3kcua0.2710.8547.574threading_2---------------------KHPLKTFYLAITAGVFISIAFVFYITATTGTPFGMAKLVGGICFSLGLILCVVCGADLFTST-VLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGMTANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFSHLTVMNFIDNLIPVTIGNIIGGGLLVGLTYWVIYLR-----------------
3PROSPECT23kcuA0.2710.8543.168threading_3---------------------KHPLKTFYLAITAGVFISIAFVFYITATTGTPFGMAKLVGGICFSLGLILCVVCGADLFTSTVL-IVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGETANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFASPEFNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLR-----------------
4PPA-I3kcuA0.2750.8544.623threading_4---------------------KHPLKTFYLAITAGVFISIAFVFYITATTGTPFGMAKLVGGICFSLGLILCVVCGADLFTST-VLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLR-----------------
5HHPRED-l3kcu_A0.2710.8549.466threading_5------------------K---HPLKTFYLAITAGVFISIAFVFYITATTGTPFGMAKLVGGICFSLGLILCVVCGADLFTSTVL-IVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFSHLTVMNFITNLIPVTIGNIIGGGLLVGLTYWVIYLR-----------------
6HHPRED-g3kcu_A0.2720.8518.172threading_6------------------KH---PLKTFYLAITAGVFISIAFVFYITATTGTPFGMAKLVGGICFSLGLILCVVCGADLFTSTVL-IVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRSHLTV-MNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLR-----------------
7SP33kcua0.2710.8546.987threading_7---------------------KHPLKTFYLAITAGVFISIAFVFYITATTGTPFGMAKLVGGICFSLGLILCVVCGADLFTST-VLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMNGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLR-----------------
8SAM-T993klyC0.2640.8778.222threading_8--------------TGEGKAKKAAYKSFLLAISAGIQIGIAFVFYTVVTTGMPYGVTKLLGGLAFSLGLILVVITGGELFTSSVLIL-VAKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTFSARSLDKVMVLILPVAMFVSSGFEHCIANMFQVPMAIGIKYDLNFVN-FIVNNLIPVTLGNIVGGGVFVGMWYWLIYLK-----------------
9MUSTER3klyC0.2670.8812.870threading_9-----------TGEGKA---KKAAYKSFLLAISAGIQIGIAFVFYTVVTTGMPYGVTKLLGGLAFSLGLILVVITGGELFTSSVLIL-VAKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTFSARSTDKVMVLILPVAMFVSSGFEHCIANMFQVPMAIGIKYADLNFVNFIVNNLIPVTLGNIVGGGVFVGMWYWLIYLK-----------------
10SPARKS3q7ka0.2550.8927.444threading_10--AAMAKVAEEAGVYKATK---HPLKTFYLAITAGVFISIAFVFYITATTGTPYGMAKLIGGICFSLGLILCVICGADLFTSTVL-IVVAKASGRITWGQLAKNWLNVYFGNLIGALLFVLLMWLSGMTANGQWGLNVLQTADHKMHHTFIEAVCLGILANLMVCLAVWMSYSGRSMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFHLTVMSFITDNLIPVTIGNIIGGGLLVGLTY-----------------------

  Predicted Tertiary Structure

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TM-score=0.639 to 1ldfA
SCOP code=f.19.1.1
TM-score=0.660 to 1ldfA
SCOP code=f.19.1.1
TM-score=0.642 to 1ldfA
SCOP code=f.19.1.1
TM-score=0.644 to 2abmA
SCOP code=f.19.1.1
TM-score=0.644 to 2abmA
SCOP code=f.19.1.1