Template-based Modeling Results for NIRB_ECOLI

Submitted Primary Sequence

>Length 847
MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAYDRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGVEARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDIYAIGECASWNNRVFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIGDAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALKAETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTFEELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYSVIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCTRECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFYIRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVLCEWTETVNTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAYDRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGVEARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDIYAIGECASWNNRVFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIGDAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALKAETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTFEELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYSVIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCTRECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFYIRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVLCEWTETVNTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA
CCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCCHHHHCCCCHHHHHHCCCEEECCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCEEEEEECCCCEEECCEEEEEEEECCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCCEEEECCCCCCEEEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHHHHHCCCCCEEEEECCCCCCEECHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAYDRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGVEARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDIYAIGECASWNNRVFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIGDAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALKAETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTFEELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYSVIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCTRECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFYIRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVLCEWTETVNTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA
5541100000000000200210133232230100001223211122020021013321211100331003422020001220110124312010231320201000001002111010411303100001103002101200341120000000000000000034121100001002100132003100210231023110200013202101232242120010231220300000000001021300230203112310000122021113100000000102120100001013001000120022322131121101020010100000112242321211011142430101000123231000000001121002002012222312320210011222122311110331121101000220031101100332031021022003112001001200130011102422231332103012111310020033220310320023125221131021000000100123222324311121003101221333010000020220100130010002004303020101122202111023310130032014010310110021022031020121021111101000110121121030112010000101210030204100000033001000001021412201000112323100300210010002002102200200210320021012100313220121012101301311203013212232012202202213342320200222323422222331202223445
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAYDRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGVEARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDIYAIGECASWNNRVFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIGDAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALKAETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTFEELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYSVIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCTRECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFYIRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVLCEWTETVNTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA
1	MUSTER	2v3aA	0.224	0.447	1.974	threading_1	--RAPLVIIGTGLAGYNLAREWRKLDGE--TPLLMITADDGRSYSKPMLSTGFSNKDADGLAMAEGAMAEQLNARILTHTRVTGIDPGHQRIWIGEE-EVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGE--GLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVN--RGIVVDRSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNPSQVAYGPMPVTVKTPACPLVVSPPPRGMD-----GQWLVEGSGTDLKVLCRDTAGRVIGYALTGAAVNEKLALNKELPGL-MA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2	SPARKS	3klja	0.245	0.443	4.032	threading_2	-KSTKILILGAGPAGFSAAKAALGKCD----DITMINSEKYLPYYRPRLNEIIAKNSIDDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHAD--EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM---------------GDLIRSSCVITAVGVKPNLDFIKDTEIAS--KRGILVNDHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGEDASYSEIIPSPILKVSGISIISCGDIENNKPS---KVFRSTQEDKYIVCMLK--ENKIDAAAVIGDVSLGTKLKKAIDSSKSFISSLDAILNNL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	PROSPECT2	2cduA	0.182	0.499	3.187	threading_3	M---KVIVVGCTHAGTFAVKQTIADHPDA--DVTAYEMNDNISFLSG-IALYLGKEDPRGLFYSSPEELSNLGANVQMRHQVTNVDPETKTIKVNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDD--EIITKTLDGKEIKSDIAILCIGFRPNTELLKGKVA-MLDNGAIITDEYMHSSNRDIFAAGDSAAVHYNPTNLATNAVRQGRLVGLNLTEDKVKDMGTQSSSGLKLYGRTYVSTGINTANNLKVSEVIIMLSTDEVLMSLVYDPKTRVILGGALSSMHDVSQSA-------------------------------------------------NVLSVCIQNKNT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDDLAMVDMLFQPQFD-----------------RPFNYLNILGQA---------------------------------------------------------------------------------------------------------------------AQAQADKA------------------------------------------------------------H
4	PPA-I	2v3aA	0.224	0.447	3.658	threading_4	--RAPLVIIGTGLAGYNLAREWRKLDGE--TPLLMITADDGRSYSKPMLSTGFSNKDADGLAMAEGAMAEQLNARILTHTRVTGIDPGHQRIWIGEE-EVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG--EGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVN--RGIVVDRSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNPSQVAYGPMPVTVKTPACPLVVSPPPRGMD-----GQWLVEGSGTDLKVLCRDTAGRVIGYALTGAAVNEKLALNKELPGLMA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	HHPRED-l	1q1r_A	0.233	0.482	2.025	threading_5	-NADNVVIVGTGLAGVEVAFGLRASGWE--GNIRLVGDATVIPHHLPPLSKYLAGKTAESLYLRTPDAYAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGAANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQV--DNGIVINEHMQTSDPLIMAVGDCARFHSQLIESVPNALEQARKIAAILCGKVPRDEAA-PWFWSDQYEIGLKMVGLSEGY---DRIIVRGSLAQPDFSVFYLQG--DRVLAVDTVNRPVEFNQSKQIITDRLPVE--PNLLGDE--------SVPL-----------------KEIIAAAKAELSS-------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	HHPRED-g	1q1r_A	0.224	0.481	2.032	threading_6	-NADNVVIVGTGLAGVEVAFGLRASGW--EGNIRLVGDATVIPHHLPPLSKYLAGKTAESLYLRTPDAYAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGAANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQV--DNGIVINEHMQTSDPLIMAVGDCARFHSQLYDSVPNALEQARKIAAILCGKVPRDEAAPW-FWSDQYEIGLKMVGLSEG---YDRIIVRGSLAQPDFSVFYLQG--DRVLAVDTVNRPVEFNQSKQIITDRLPV--EPNLLGDESVPLKEIIAAKAELSSA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	SP3	3klja	0.250	0.444	4.336	threading_7	-KSTKILILGAGPAGFSAAKAALGKC----DDITMINSEKYLPYYRPRLNEIIAKNKIDDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHAD--EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM---------------GDLIRSSCVITAVGVKPNLDFIKDTEIAS--KRGILVNDHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGEDASYSEIIPSPILKVSGISIISCGDIENNKP---SKVFRSTQEDKYIVCMLKEN--KIDAAAVIGDVSLGTKLKKAIDSSKSFDNISLDAILNNL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SAM-T99	3kljA	0.237	0.444	2.948	threading_8	-KSTKILILGAGPAGFSAAKAALGKCDD----ITMINSEKYLPYYRPRLNEIIAKNKIDDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHADE--IFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEMG---------------DLIRSSCVITAVGVKPNLDFIKDTEIASK--RGILVNDHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGEDASYSEIIPSPILKVSGISIISCGDIENNKPS----VFRSTQEDKYIVCMLK--ENKIDAAAVIGDVSLGTKLKKAIDSSKSFDNISSLDAILNNL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	3kljA	0.252	0.440	1.931	threading_9	-KSTKILILGAGPAGFSAAKAALGKCD----DITMINSEKYLPYYRPRLNEIIAKKSIDDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHAD--EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM---------------GDLIRSSCVITAVGVKPNLDFIKDTEIAS--KRGILVNDHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGEDASYSEIIPSPILKVSGISIISCGDIENNKPS---KVFRSTQEDKYIVCMLKEN--KIDAAAVIGDVSLGTKLKKAIDSSKSFISSLDAILL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	SPARKS	3ef6a	0.236	0.465	3.680	threading_10	---THVAIIGNGVGGFTTAQALRAEGFE--GRISLIGDEPHLPYDRPSLSKAVDGSLERPPILAEADWYGEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGF--SGEGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLACD--RGVIVDHCGATLAKGVFAVGDVASWPLRAGGTYMNAQRQAAAVAAAILGKNVSAP-QLPVSWTEIAGHRMQMAGDIEGPGD---FVSRGMPGSGAALLFRLQE--RRIQAVVAVDAPRDFALATRLVEARAAIE--PARLADLSNSMRDFV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.630 to 1xhcA SCOP code=c.3.1.5	TM-score=0.647 to 1nhqA SCOP code=c.3.1.5	TM-score=0.607 to 1xhcA SCOP code=c.3.1.5	TM-score=0.648 to 1nhqA SCOP code=c.3.1.5	TM-score=0.633 to 1xhcA SCOP code=c.3.1.5