Template-based Modeling Results for NHAR_ECOLI

Submitted Primary Sequence

>Length 301
MSMSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERMIQHPAVQRICNTDYSALFSPAVR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSMSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERMIQHPAVQRICNTDYSALFSPAVR
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCEEECHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSMSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERMIQHPAVQRICNTDYSALFSPAVR
5513302111010010004211000003102111221110032004314020021212102003001100310240021022013113233322010100002000310002002201330230101002111310021023230000001011322433101002012000001122212332112103422000014301002101200332212020001012010010001331000000100011113242002012143011200000022223110022002000321122234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSMSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERMIQHPAVQRICNTDYSALFSPAVR
1	MUSTER	3fxrA	0.147	0.970	2.666	threading_1	M----LKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDEAQPLYVSDVVIVGQRQHPMANATRLAELQECRWAFSSAPRGPGAIIRNAFARYGLPPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHAL-----
2	SPARKS	3fxra	0.144	0.970	4.748	threading_2	----MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDEAQPLYVSDVVIVGQRQHPMANATRLAELQECRWAFSSAPRGPGAIIRNAFARYGLPPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHAL-----
3	PROSPECT2	1iz1a	0.197	0.944	3.987	threading_3	M-----EFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHP---GIEIVNIAQEDLYLAVHRSFGKTCKLADLRAVELTLFGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAA--IRWPDIAFARVGTRVKVPISCIFRKEK-QPPILARFVEHVRRS------A
4	PPA-I	3fxrA	0.144	0.970	4.420	threading_4	----MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDEAQPLYVSDVVIVGQRQHPMANATRLAELQECRWAFSSAPRGPGAIIRNAFARYGLPPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHAL-----
5	HHPRED-l	1al3_A	0.139	0.691	3.568	threading_5	-----------------------------------------------------------------------------------------TWPDKGSLYVATTHTQARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLY--DDLVMLPCYHWNRSIVVEHPLATKGSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVD-PVSDPDLVKLDANGFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDAV-
6	HHPRED-g	3fzv_A	0.140	0.900	2.927	threading_6	-----YTLRQLKYFVTTVECGSVAEASRKLYIAQ-SISTAVKGLEESF-VQLF--------LTPAGARFYRKAQELLR-AHEFEQN-LADDVIAGQIDIGCFETVAPLYLPGLIAGFRQAYPGVEIRIRDGEQQELVQGLTSGRFDLAFLYEHDLD---STIETEPL-PQRPHALLPEGHRFQVSLRDLCLEP-ILLDVQPS-RTYFVSLFEELGLTPNIAFSSPSIE-VRG-VGQGFGFSLLVTRPHSECTYDGKVV-VDLAPVSTSGLAAAWLKRAQLTKPARLFVDYCREQLGK----
7	SP3	3fxra	0.147	0.970	5.174	threading_7	M----LKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDEAQPLYVSDVVIVGQRQHPMANATRLAELQECRWAFSSAPRGPGAIIRNAFARYGLPPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHAL-----
8	SAM-T99	3fxrA	0.149	0.957	3.265	threading_8	----MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAA-HKHDIDTDLEAQPLYVSDVVIVGQRQHPMANRLAELQECRWAFSSAPRGPGAIIRNAFARYGLEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDLPNPTIYVLRRHDLPVTPAAAGLIRWIQH--------
9	MUSTER	1iz1B	0.181	0.957	2.570	threading_9	-----MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQ-EDLYLAVHRSQSGKKTCKLADLRAVELTLFPRGGSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAAI--RWPDIAFARVGTRVKVPISCIFRKEK-QPPILARFVEHVRRSAKD----
10	SPARKS	1iz1a	0.188	0.953	4.732	threading_10	-----MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIE-IVNIAQEDLYLAVHRSQSGGKTCKLADLRAVELTLFPRGPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAAIRWPDIAFARI-VGTRVKVPISCIFRKEK-QPPILARFVEHVRRSA------

Predicted Tertiary Structure


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TM-score=0.674 to 2esnC SCOP code=a.4.5.37	TM-score=0.679 to 2esnC SCOP code=a.4.5.37	TM-score=0.673 to 2esnC SCOP code=a.4.5.37	TM-score=0.790 to 1iz1B SCOP code=a.4.5.37	TM-score=0.673 to 2esnC SCOP code=a.4.5.37