Template-based Modeling Results for NFRB_ECOLI

Submitted Primary Sequence

>Length 745
MDWLLDVFATWLYGLKVIAITLAVIMFISGLDDFFIDVVYWVRRIKRKLSVYRRYPRMSYRELYKPDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYPNDPDTQRDVDEVCARFPNVHKVVCARPGPTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELRLFNYLVERKDLIQIPVYPFEREWTHFTSMTYIDEFSELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLADGDGIAFDVQSLTEDYDIGFRLKEKGMTEIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSTAVRQKSRWIIGIVFQGFKTHKWTSSLTLNYFLWRDRKGAISNFVSFLAMLVMIQLLLLLAYESLWPDAWHFLSIFSGSAWLMTLLWLNFGLMVNRIVQRVIFVTGYYGLTQGLLSVLRLFWGNLINFMANWRALKQVLQHGDPRRVAWDKTTHDFPSVTGDTRSLRPLGQILLENQVITEEQLDTALRNRVEGLRLGGSMLMQGLISAEQLAQALAEQNGVAWESIDAWQIPSSLIAEMPASVALHYAVLPLRLENDELIVGSEDGIDPVSLAALTRKVGRKVRYVIVLRGQIVTGLRHWYARRRGHDPRAMLYNAVQHQWLTEQQAGEIWRQYVPHQFLFAEILTTLGHINRSAINVLLLRHERSSLPLGKFLVTEGVISQETLDRVLTIQRELQVSMQSLLLKAGLNTEQVAQLESENEGE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDWLLDVFATWLYGLKVIAITLAVIMFISGLDDFFIDVVYWVRRIKRKLSVYRRYPRMSYRELYKPDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYPNDPDTQRDVDEVCARFPNVHKVVCARPGPTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELRLFNYLVERKDLIQIPVYPFEREWTHFTSMTYIDEFSELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLADGDGIAFDVQSLTEDYDIGFRLKEKGMTEIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSTAVRQKSRWIIGIVFQGFKTHKWTSSLTLNYFLWRDRKGAISNFVSFLAMLVMIQLLLLLAYESLWPDAWHFLSIFSGSAWLMTLLWLNFGLMVNRIVQRVIFVTGYYGLTQGLLSVLRLFWGNLINFMANWRALKQVLQHGDPRRVAWDKTTHDFPSVTGDTRSLRPLGQILLENQVITEEQLDTALRNRVEGLRLGGSMLMQGLISAEQLAQALAEQNGVAWESIDAWQIPSSLIAEMPASVALHYAVLPLRLENDELIVGSEDGIDPVSLAALTRKVGRKVRYVIVLRGQIVTGLRHWYARRRGHDPRAMLYNAVQHQWLTEQQAGEIWRQYVPHQFLFAEILTTLGHINRSAINVLLLRHERSSLPLGKFLVTEGVISQETLDRVLTIQRELQVSMQSLLLKAGLNTEQVAQLESENEGE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHCEEEEEEEECCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDWLLDVFATWLYGLKVIAITLAVIMFISGLDDFFIDVVYWVRRIKRKLSVYRRYPRMSYRELYKPDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYPNDPDTQRDVDEVCARFPNVHKVVCARPGPTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELRLFNYLVERKDLIQIPVYPFEREWTHFTSMTYIDEFSELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLADGDGIAFDVQSLTEDYDIGFRLKEKGMTEIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSTAVRQKSRWIIGIVFQGFKTHKWTSSLTLNYFLWRDRKGAISNFVSFLAMLVMIQLLLLLAYESLWPDAWHFLSIFSGSAWLMTLLWLNFGLMVNRIVQRVIFVTGYYGLTQGLLSVLRLFWGNLINFMANWRALKQVLQHGDPRRVAWDKTTHDFPSVTGDTRSLRPLGQILLENQVITEEQLDTALRNRVEGLRLGGSMLMQGLISAEQLAQALAEQNGVAWESIDAWQIPSSLIAEMPASVALHYAVLPLRLENDELIVGSEDGIDPVSLAALTRKVGRKVRYVIVLRGQIVTGLRHWYARRRGHDPRAMLYNAVQHQWLTEQQAGEIWRQYVPHQFLFAEILTTLGHINRSAINVLLLRHERSSLPLGKFLVTEGVISQETLDRVLTIQRELQVSMQSLLLKAGLNTEQVAQLESENEGE
4310000000000001000000000000000010000000000101110112232331223312333332000000011111000100110022031320100000121223012001200331220000001332320101000000100021231131200000001032101210020011004332001000011333121000000011001000100000211201010000000000300220133131220223001100100020233112100011111122323312211221322210001321232022002200110100001003213120100110000121100001001000000000000000021011202101101110000000000000000010010000002110101000000000000000000001001100321323312122113312222232422320010012241023310220132334313001001222102232001000222112132232131122002202120022000000212331000001111222001100320223020010122101200331133342331311123123333223332231232101111100200111020222001100232242222011000121000111013001112211110111002111202201213233434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDWLLDVFATWLYGLKVIAITLAVIMFISGLDDFFIDVVYWVRRIKRKLSVYRRYPRMSYRELYKPDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYPNDPDTQRDVDEVCARFPNVHKVVCARPGPTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELRLFNYLVERKDLIQIPVYPFEREWTHFTSMTYIDEFSELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLADGDGIAFDVQSLTEDYDIGFRLKEKGMTEIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSTAVRQKSRWIIGIVFQGFKTHKWTSSLTLNYFLWRDRKGAISNFVSFLAMLVMIQLLLLLAYESLWPDAWHFLSIFSGSAWLMTLLWLNFGLMVNRIVQRVIFVTGYYGLTQGLLSVLRLFWGNLINFMANWRALKQVLQHGDPRRVAWDKTTHDFPSVTGDTRSLRPLGQILLENQVITEEQLDTALRNRVEGLRLGGSMLMQGLISAEQLAQALAEQNGVAWESIDAWQIPSSLIAEMPASVALHYAVLPLRLENDELIVGSEDGIDPVSLAALTRKVGRKVRYVIVLRGQIVTGLRHWYARRRGHDPRAMLYNAVQHQWLTEQQAGEIWRQYVPHQFLFAEILTTLGHINRSAINVLLLRHERSSLPLGKFLVTEGVISQETLDRVLTIQRELQVSMQSLLLKAGLNTEQVAQLESENEGE
1	MUSTER	1qgkA	0.085	0.952	0.980	threading_1	VENLPTFLVELSRVLAQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARRENYVLHTLGTETYRPACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEEQLQDKSNEILTAI------IQGMRKEEPSNNVKLAATNALLNSLEFTKANFDMQVVCEATQCPDTRVRVAALQNLVKIMSLYYITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPNDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWEGPEPSQLKPLVIQAMPTLIELMKVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTD-----------RPDGHQNNLRSSAYESLMEIVKNSACYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVQHQDALQISDVVMA---SLLRMFQSTAGSGGVQEDALMAVSTLVEVLGGEFKYMEAFKPFLGIGLKNYA-------EYQVCLAA------VGLVGDLCRALQSNIIP---FCDEVMQLLLENLGNENVHSVFGDIALAIGGEFKKQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDIDHIAGDEDHVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTNK
2	SPARKS	2xwub	0.078	0.948	1.014	threading_2	FTQITRFASGSKIVLTRLCVALASLALSMMAVADMVRLFQAPVDGQGRCLALLELLTVLPEEFQTSRLPQ--------YRKGLVRTSLAVECGAV-FPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQDC-------EALIQAAFAALQDSELFDSSVEAIAISQPDAQRYVNTLLKLIPLVLGLEQLRQAVQNGDMETSHGICRIAVALGENHSRALLDQVEHWQSFLAL--------VNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQDD------ILSFEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPGFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSY-SWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGNPELSVSSVSTLKKICRECKYDANIVAVSQDVLMKQIHKTSQCMWLMQALGFLSALQVEEILKNLHSLSPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDISHPNPVVVVLQQVFQLIQKVLSKWLNDAQVV--------EAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLTRQLVHIFAHEPAHFPPIEALFLLVTSVTLTLFQQGPRDHPDIVDSFMQLLAQALKRKPDLFLCERLDVKAVFQCAVLAPTVKASCGFFTELLPRCGEVESVGKVVQEDGR
3	PROSPECT2	1qgra	0.084	0.932	2.182	threading_3	MRAAVENLPTFLVELSRVLAQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREHTLGTETYRP-------SSASQCVAGIACAEIPVNQWPELVANVTNPNSTEHMKESTLEAIGY-------ICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLANFDKESERHFIMQVVCEATQCPDITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETLRSSAYESLMEIVKNSACYPAVQKTTLVIMERLFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFSGGVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNY--AEYQVCLAAVGLVGD-LCRALQSNIIPFCDEVMQLLLENLG----------------NENVHRSVKPQILSVF-----------GDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDVEFILSFIDHIAGDEDH-------TDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTQA
4	PPA-I	2d27A	0.176	0.191	1.259	threading_4	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EQRSAETRIVEALLERRRLKDTDLLRARQLQAESGGLLALLGRLGLVSERDHAETCAEVLGLPLVDARQLGPELPEVQGLSLRFLKQFHLCPVGERDGRLDLWIADPYDDYAIDAVRLATGLPLLLHVGLRSEIDDLIERWY--------------------------------------------------------------------------------------------------------------------------
5	HHPRED-l	2d28_C	0.180	0.187	3.792	threading_5	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EQRSAETRIVEALLERRRLKDTDLVRARQ--ESG-GLLALLGRLGLVSERDHAETCAEVLGLPLVDARQLGDTP-EVQGLSLRFLKQFHLCPVGERDGRLDLWIADPYDDYAIDAVRLATGLPLLLHVGLRSEIDDLIERWYG-------------------------------------------------------------------------------------------------------------------------
6	HHPRED-g	2d28_C	0.180	0.187	4.524	threading_6	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EQRSAETRIVEALLERRRLKDTDLVRARQ--ESG-GLLALLGRLGLVSERDHAETCAEVLGLPLVDARQLGDTP-EVQGLSLRFLKQFHLCPVGERDGRLDLWIADPYDDYAIDAVRLATGLPLLLHVGLRSEIDDLIERWYG-------------------------------------------------------------------------------------------------------------------------
7	SP3	2xwub	0.088	0.979	0.739	threading_7	VENVEKALHQLYYDIENKNLAQKWLMQAQAWHFSWPEIQYFGASALHIKISRYDIPTDQYESLKAQ---LFTQITRFASGSKIVLTRLCVALASLMMPDVADMVRLFQAPVDGQGRCLALLELLTVLPEEFQTSRLPQYRKGLVRTSLAVE--CGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQ--------LEVPLQDCEALIQAAFALQDSELFDSSVEAIVNAISQPDAQRYVNTL-LKLIPLVLGLQEQLRQAVQNDMETSHGICRIAVANHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTAEKQAVYQQVYRPVYFQLVDVLLHKAQFGFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRL--LTSYSWQHTEALLYGFQSIYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGNPELSVSSVSTLKKRECKYDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDISHPQKVLSKWLNDAQVVEAVCAIFEKSVKTLLPMVPQLCEMLGRMYSTIPQASALDLTRQLVHIFAHEPAHFPPIEALFLLVTSVTLTLFQQGPRDHPDIVDSFMQLLAQALKRKPDLFLCERLDVKAVFQCAVLAPTVKASCGFFTELLPRCGEVESVGKVVQEDGR
8	SAM-T99	1p9wA	0.074	0.128	3.487	threading_8	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DFFSLAEELAPIIKLINALGEA---IKEGASDIHIETFEKVRVSTPSSHGERVVRLLDKNATRLDLHSLGTAHNHDNFRRLIKRPHGIILVTGPTGSG
9	MUSTER	3ea5B	0.081	0.925	0.971	threading_9	KKLSNDNFLQFAGLSSQVLIDLEGRILAALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNQIKTSIEPRIANAA-----AQLIAAIADIELPHGAWPEL-VDNTGAEQPENVKRASLLALGSSNNILIAIVTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMAEDIEVQAAAFGCLCKIMSKY-----YTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWS-------TICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLN------LLTRQNEDPEDDDWNVSMSAGACLQLFA--QNCGNHI-------LEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPVHQALPSILNLM-SLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQPKVATNCSWTIINLVEQLAYPALVDGLIGAANARASAFSALTTMVEYATDTVATSASISTFV---------MDKLGQTMSVDEQLTLEDAQSLQELQSNILTVLAAVIRKSSVEADMLMGLFFRLLEKAFIEDDVFYAISALAASLGKGFEK-YTFSPY------LLKALNQVDSVGFIADISNSLEEDFRRY---SDAMMNVLAQMISNPNARSVFGDIASNIGADFIPAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLPEALFPYVGTI-AQVAEDPQLYSE--DATSRAAVGLIGDIAAMFIKQFYGIDYIKRTRSGQLFS
10	SPARKS	3m1ic	0.093	0.938	0.824	threading_10	QKNLINKSDLTLVQILKQEWFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAKALHKEFEQIKLCLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNMTSPDTRAITLKCLTEVSNLKI---PQDNDLIKRQTVLFFQNTLQQIATSVMPTADLKATYANANGNDQSFLQDLAMFLTT--YLARNRALLESDESLRELLLNAHQYLIQLSKIEERELFKTTLDYW--------HNLVADLFYEPLKKHIYEEICSQLRLVIIENMVRPEEVLVVENDEGEIVRESDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWS-----------------WHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLTVKKRGKDNKAVVASDIMYVVGQYPRFLKA--------HWNFLRTVILKLFEFHEGVQDMACDTFIKIVQKC-------KYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGISVAERNRLLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKVAVCTSMQLGHIYYNMLQLYRAVSSMISAQVAAEGLIATKTPVRGLRTIKKEILKLVETYISKARNLDDVVKLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSFECTLDMINKDF-TEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKFVDAICWAFKHNNR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.745 to 1qgkA SCOP code=a.118.1.1	TM-score=0.865 to 3ea5B SCOP code=a.118.1.1	TM-score=0.560 to 1m8xA SCOP code=a.118.1.8	TM-score=0.763 to 1qgkA SCOP code=a.118.1.1	TM-score=0.508 to 2d27A SCOP code=d.52.10.1