Template-based Modeling Results for NARX_ECOLI

Submitted Primary Sequence

>Length 598
MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE
5533121111001100000000000000010000000200210130013000000100100020222332320132013111223023113231112102000310222012001413223101210220021013000002312321130021021000001001100001101120120022012002102332122303222430011002001300210140122023202321111231131011012002303332211310120020013013132010000123323101111022312032320310232212213412101010222323200000002222312320120021002101101212221232221112321210022012200300000101020022203222320230022023102200210130022011312331022002200220034120202010223332022300100010022001101410402101010111342010101111110133224222100110110023040202021133200100010012423332323348
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE
1	MUSTER	3gigA	0.241	0.355	1.205	threading_1	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KERERLEEKLEDANERIAELVKLEERQRIARDLHDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKG----IRLKDELINIKQILEAA-DIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGEE--NSFSHGLLGMRERLEFANGSLHIDTEN--GTKLTMAIPNN------------
2	PROSPECT2	1qgra	0.104	0.953	2.134	threading_2	MANPGNSQVARVAAGLQIKNSLASQCVAGIACAEIPVNQWPELIPQLVANVHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNESERHFIMQVVCECPDTRVRVAALQNLVKIMSLYYQYMETYDEVALQGIEFWSNVCDEEMDLAIEASEAAEQFYAKGALQYLVPILTQT-LTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDPSQLKPLVIQAMPTLIERDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQDRIQFNDLQSLLCATLQNVLHQDALQISDVVMASLLDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLQAQVDKSDYDMVDYLNELREEAYTGIVQGLKGD------------------------QENVHPDVMLVQPRVEFILSFI---DHIAGDEDHTDGVVCTAFGKDVLKLVEARNQA
3	PROSPECT2	2bkuB	0.098	0.920	2.061	threading_3	MELVSKDSVKTQQFAQRWIANAAAQLIAAIADIELMVDNTGAEQPENVKRASLLALGYMCESADALVSSSNNILIAIVQGAQSTELADSLIFIKNNMEREGERNYLMQVVCE-ATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALKVASMTVEFWSTICEEEIDIAYELAALSSIKDVVPNLLNLLTRQNEDP-EDDDWNVSMSAGACLQLFAQNCGNHKVQRTYYVHQALPSILNKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDG-------------------------LIGAANRIDNEFNARASAFSALTTMVTVAETSASISTFVMDKLGQLEDAQSLQELQSNILTVLAAVMLMGLFFRLLEKKDSAFIEDDFYAISALAASLGKGFEKYLETFSPYLVDSPVSITAVGFIADISNSLEEDFRISNPNARRELKPAVLSVFGDIASNIGADFIPYLND--------------IMALCVAAQNTKPENGTLEALVLDAYVGIVAGLHDKPEIAAMFPDG-------SIKQFYGQRSGQLFS
4	SPARKS	3ehfa	0.201	0.291	2.885	threading_4	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIARDLHDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSKGIR------LKDELINIKQILEAADI--FIYEEEKWPENISLLNENILSCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKG-------EHGLL-GRERLEFANGSLHIDTENGTKLTAIPN----------------
5	PPA-I	3gigA	0.226	0.355	2.281	threading_5	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KERERLEEKLEDANERIAELVKLEERQRIARDLHDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIR-----LKDELINIKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGEE--NSFSHGLLGMRERLEFANGSLHIDTEN--GTKLTMAIPNN------------
6	PROSPECT2	1w63A	0.095	0.809	2.060	threading_6	MPARTARTQAEEREMIQKECAAIRSSFCRNVAKLLYMHMLGYPAHFGQLEFTDKRIGYLGAMLLLDERQDVHLTNCIKNDLNHSTLGCMGSSEMCRDLAGEVEK---------LLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPAEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTTSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLL--------------------------------------------------------------------NNDKNIRYVALTSLLKTVQTDHNAVQRHRGMMKELLYFLDSCEPEFKADCASGIFLKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLV-SGQCEEEEPIQVTEDEVLDILESVLIYALTAIMKLST------------------------RFTCTVSIYGSSIDVELQQRAVEY---NALFKKYDH---------MRSALLERMPVMEK
7	HHPRED-l	2c2a_A	0.192	0.356	3.605	threading_7	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MENVTES----KELE--RLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGLDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLNREKVDLCDLVESAVNAIKESHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDYVKVILDEKDGGVLIIVEDNGIGIPDHA---TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR-----------
8	HHPRED-g	3ehh_A	0.238	0.309	3.007	threading_8	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NERIAELVKLEERQR-ARDLVDTLGQKLSL-GLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSS-----KGIRLKDELINIKQILEA-ADI-FIYEEEKWPENISLLNENILS-CLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKG--------HGLLG-RERLEFANGSLHIDT--ENGTKLT-AIPN-------------
9	PROSPECT2	1b3ua	0.085	0.846	2.042	threading_9	AAADGDDSLYPIAVLIDELRLNSIKKLSTIALALGVERTRSELLPFLTDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESRAISHEHSPSDLEAHFVPLSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLSVRLLAVEACVNIAQLQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVPEITKTDLVPAFQNLEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVS----------DANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQL----------------------KDECPEVRLNIIDCVNEVIGIRQLSQSLLPAIVELAVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEHATIIPKVLAMSGDPNTLFCINVLSEVCGQDI--------------TTKHMLPTVLRMAGKSLQKIGPILDNSTLQ------------------SEVKPILEKLTQDQDVDVKYFAQEALTVL----------------------------SLA
10	SP3	3ehfa	0.230	0.291	3.097	threading_10	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIARDLHDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSKGIR-----LKDELINIKQILEA---ADIFIYEEEKWPENISLLNENILSCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKG-------EHGL-LGRERLEFANGSLHIDTEN--GTKLTA-IPN-------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.458 to 1ys3B SCOP code=d.122.1.3	TM-score=0.655 to 1qgkA SCOP code=a.118.1.1	TM-score=0.463 to 1ys3B SCOP code=d.122.1.3	TM-score=0.884 to 1b3uA SCOP code=a.118.1.2	TM-score=0.689 to 3ea5B SCOP code=a.118.1.1