Template-based Modeling Results for NARU_ECOLI

Submitted Primary Sequence

>Length 462
MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAHKEAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRKFSQK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAHKEAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRKFSQK
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAHKEAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRKFSQK
553333432321033021312200233022001110000000000000000000000000241213022210000000000000000000000022010321000000000000000000121231100000000000000000000000100210132100001000000010000001000000000011112112100102011100000000000211122111222233222242201200200232200000000000000000000000100112023110000000000000001000010012111110000000000000000001011212010000000000000001012100000002002200112152321223201220222000000000000000000002000000211111100000000000000000000102343344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAHKEAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRKFSQK
1	MUSTER	1pw4A	0.135	0.911	1.990	threading_1	FKPAPHKAR--------PAAEI--DPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYL--VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWA-TSSIAVMFVLLFLCGWFGMGWPPCGRTMVHWWSQKERGGIVSVWN----CAHNVGGGIPPLLFLLGMAWFNDWHAALYMPA-FCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVFALDKSSWAYFLYEYAGIPGTLLCGWMSDKFRGNRGATGVFFMTLVTIATIVYWM--NPAGNPTVDMICMIVIGFLIYG--------PVMLIGLHALELAP-------------KKAAGTAAGFTGLFGYLGGVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGRRHEQLL
2	SPARKS	1pw4a	0.121	0.909	5.339	threading_2	APHKARLPAAEI------------DPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYL--VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFV-PWATSSIAVMFVLLFLCGWFQGGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGM-----AWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFAKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGP---------VMLIGLHALELAPKKA-------------AGTAAGFTGLFGYLGGVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQ
3	PROSPECT2	1pw4A	0.123	0.918	3.027	threading_3	FKPAPHKARLP-----AAEIDPTYR----RLRWQIFLGIFFGYAAYYLVRKNFALAMPYL--VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAW-----FNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYG---------PVMLIGLHALELAPKK-------------AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGLQELVP
4	PPA-I	1pw4A	0.117	0.909	3.672	threading_4	PHKARLPAAEI-------------DPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYL--VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN-----DWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFAKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGP---------VMLIGLHALELAPK-------------KAAGTAAGFTGLFGYLGGVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGQLLQELV
5	HHPRED-l	3o7q_A	0.109	0.835	5.284	threading_5	-----------------------------RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQ-AFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFAEI-----MNYTLFLVGLFIIAAGLGCETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVSLVLSVQTPYMIIVAIVLLVALLIMLT--KFPALQS---DNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA------GGHVGL-IALTLCSAFMSIQYPTIFSLGIKNLGQD----------------------TKYGSSFI-VMTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFA--RFRSQT----
6	HHPRED-g	3o7q_A	0.106	0.833	4.906	threading_6	-----------------------------RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQ-AFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFAEI-----MNYTLFLVGLFIIAAGLGLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVSLVLSVQTPYMIIVAIVLLVALLIML--TKFPALQSD----NHSDKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF-A-----GGHVGL-IALTLCSAFMSIQYPTIFSLGIKNLG----------------------QDTKYGSSFI-VMTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARFR--SQT----
7	SP3	1pw4a	0.130	0.913	4.804	threading_7	--FKPAPHKARL-----PAAEI--DPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYL--VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFV-PWATSSIAVMFVLLFLCGWFQGGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGM-----AWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFAKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKA----------------------AGTAAGFTGLFGYLGGVAASAIVGYTVDFFGWD-GGFMVMIGGSILAVILLIVVMIKRRHEQL
8	SAM-T99	1pw4A	0.141	0.857	2.838	threading_8	----------------------------RRLRWQIFLGIFFGYAAYYLVRKNFALAMPYL--VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFV-PWATSSIAVMFVLLFLCGWFGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN------DWHAALYMPAFCAILVALFAFAMMRDTPQS--CGLPPIEEYKNDTAKMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKALDKSSWAYFLYEYAGIPGTLLCGWMSDKFRGNRGATGVFFMTLVTIATIVY------WMNPAGNPTVDMICMIVIG-----------------FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKR----
9	MUSTER	3o7pA	0.111	0.840	1.438	threading_9	---------------------------------RSYIIPFALLCSLFFLWAVANNLNDILLPQ-FQQAFFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE--IMNYTLFLVGLFIIAAGLGCLETAAPFVTVLGPESSGHFRLNLAQTFASFGAIIAVVFGQSLIQDVLDKMSPEQLSAYKHSLMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA-------GGHVGLIALTLCSAFMSI-------QYPTIFSLGIK------NLG---------QDTKYGSSFIVMT--IGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARFRS-------Q
10	SPARKS	3o7pa	0.122	0.835	3.405	threading_10	---------------------------------RSYIIPFALLCSLFFLWAVANNLNDILLPQ-FQQAFFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE--IMNYTLFLVGLFIIAAGLGCLETAAPFVTVLGPESSGHFRLNLAQTFASFGAIIAV----VFGQSLILSNVPHQSQDVLDKMYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLRIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF-----AGGHVGLIALTLCSAFMSI---------QYPTIFSLGIKNL---------------GQDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFAR--FRSQT----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.892 to 1pw4A SCOP code=f.38.1.1	TM-score=0.899 to 1pw4A SCOP code=f.38.1.1	TM-score=0.894 to 1pw4A SCOP code=f.38.1.1	TM-score=0.909 to 1pw4A SCOP code=f.38.1.1	TM-score=0.897 to 1pw4A SCOP code=f.38.1.1