Template-based Modeling Results for NARQ_ECOLI

Submitted Primary Sequence

>Length 566
MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAINIAGSLRMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHLNANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIGIFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPLDTNLPNELGLLAKTFNQMSSELHKLYRSLEASVEEKTRDLHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRDNEAAEYLELNVGENWRISEGQPNPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLNSVSSMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIPEDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAKLTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRDNGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISFRSAEGEESQLM
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAINIAGSLRMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHLNANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIGIFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPLDTNLPNELGLLAKTFNQMSSELHKLYRSLEASVEEKTRDLHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRDNEAAEYLELNVGENWRISEGQPNPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLNSVSSMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIPEDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAKLTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRDNGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISFRSAEGEESQLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAINIAGSLRMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHLNANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIGIFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPLDTNLPNELGLLAKTFNQMSSELHKLYRSLEASVEEKTRDLHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRDNEAAEYLELNVGENWRISEGQPNPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLNSVSSMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIPEDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAKLTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRDNGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISFRSAEGEESQLM
55343112110030000000000001000000002122012001200000000110011132223202211220132132221231121112320221012002101201420242312102210220021012001002211331121010011000001001000012201220010023002002303312131211223222000200200130021024013202201221132122023102100200220232311220022002102312302001011122121231223231200101011221000100021322221210021002101201212201321221112321210022002201300000101020023203333220221022003002200310030022011212323022002200210243130201010223222022301100010022001100410402101000011241100010211121013232231210011011002302020201022320010001021243333424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAINIAGSLRMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHLNANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIGIFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPLDTNLPNELGLLAKTFNQMSSELHKLYRSLEASVEEKTRDLHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRDNEAAEYLELNVGENWRISEGQPNPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLNSVSSMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIPEDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAKLTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRDNGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISFRSAEGEESQLM
1	MUSTER	3gigA	0.226	0.375	1.209	threading_1	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KERERLEEKLEDANERIAELVKLEERQRIARDLHDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGI----RLKDELINIKQILEAA-DIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQL-WKEVVITVSDDGTFKGEE--NSFSHGLLGMRERLEFANGSLHIDTEN--GTKLTMAIPNN--------
2	PROSPECT2	1w63A	0.098	0.846	2.075	threading_2	MPAPIRLRQAEEREMIQKECAAICRNVAKLLYMHMLGYPAHFGQLEFTDKRIGYLGAMLLLDERQDVHLLTNCIKNDLNHS----------TQFVQGLSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPQVRILRLLRILGRNDDDSSEAMNDILAQVATNTTSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLL-------------------------------------------NNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRIRGMMKELLYFLADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLV-SGQCEEEEPIQVTEDEVLDILESVLIYALTAIMKLST-------------------------RFTCTVSIYGSSIDVELQQRAVEY---NALFKKYDH--MRSALLERMPVMEK---
3	PROSPECT2	1qgra	0.104	0.984	2.014	threading_3	MSLTSKDPDIKAQYQQRWLASQCVAGIACAEIPVNQWPELQLVANVTNMKESTLEAIGYIDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYDEVALQGIEFWSNVCDEEMDLAIEASEAAEQFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCDIVPHVLPFIKEHPSQLKPLVIQAMPTLIERDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSSAYESLMEIVKCYPAVQKTTLVIMERLQQVLDRIQFNDLQSLLCATLQNVVVMASLLRMFSGGVQEDAGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVV---------LNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVSFIDHIAGDEDHTDGVV
4	SPARKS	3ehfa	0.236	0.307	2.884	threading_4	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIARDLHDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSKGIR-----LKDELINIKQILEA---ADIFIYEEEKWPENISLLNENILSCLKEAVTNVVKHSQAKTCRVDIQQL-WKEVVITVSDDGTFKG-------EHGLL-GRERLEFANGSLHIDTENGTKLTAIPN------------
5	PPA-I	3gigA	0.212	0.375	2.537	threading_5	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KERERLEEKLEDANERIAELVKLEERQRIARDLHDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIR-----LKDELINIKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQL-WKEVVITVSDDGTFKGEE--NSFSHGLLGMRERLEFANGSLHIDTEN--GTKLTMAIPNN--------
6	PROSPECT2	2bkuB	0.099	0.963	1.996	threading_6	MELVSKDSVKTQQFAAAQLIAAIADIELPHIMVDNTGAEQPENVKRASLLALGYMCESADALVSSSNNILIAIVQGAQSTETSKAVRLLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALVASMTVEFWSTICEEEIDIAYELAQALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGANHILEPVLEFVEQNKVQRTYYVHQALPSILNKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKVATIINLVEQLAEATPSPI------YNFYPALVDGLIGAANRIDNEFNARASAFSALTTMVESASISTFVMDKLGQLEDAQSLQELQSNILTVLAAVMLMGLFFRLLEKKDSAFIEDDFYAISALAASLGKGFEKYLETFSPYLVDSPVSITAVGFIADISNSLEEDFRISNPNARRELKPAVLSVFGDIASNIGADFIPYLND---------------IMALCVAAQNTKPENGTLEALVLDAYVGIVAGLHDKPEAMFPDGSIKQFYGQTRSGQLFSQATL
7	HHPRED-l	2c2a_A	0.169	0.376	3.823	threading_7	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MENVTESKELE---RLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGLDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLEREKVDLCDLVESAVNAIKSSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDYVKVILDE-KDGGVLIIVEDNGIGIPDHA---TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR-------
8	SP3	3ehfa	0.241	0.307	3.049	threading_8	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIARDLHDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSKGIR-----LKDELINIKQILEA---ADIFIYEEEKWPENISLLNENILSCLKEAVTNVVKHSQAKTCRVDIQQLWK-EVVITVSDDGTFKG-------EHGL-LGRERLEFANGSLHIDTEN--GTKLTA-IPN---------
9	PROSPECT2	1b3ua	0.081	0.869	1.968	threading_9	AAADGDDSLYPIAVLILNSIKKLSTIALALGVERTRSELLPFLTDTIYVLLALAEQLTTLVGGPEYVHCLLPPLESLATVEELRAISHEHSPSDLEAHFVPLVKRLAGLFSVCYPRVSSAVKAELRQYFRNLRAAASKLGEFAKVLELDNVKSEIIPMFSNLALAVEACVNIAQLLPQEDALVMPTLRQAAEDK---------SWRVRYMVADKFTELQKAVGP--EITKTDLVPAFQNLEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKD------NTIEHLLPLFLAQLKDECPEVRLNDCVNEVIGIRQLSQSLLPAIVELAVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEHATIIPKVLAMSGDPNTLFCINVLSEVCGQDI--------------TTKHMLPTVLRMAGKSLQKIGPILDNSTLQ-------------------SEVKPILEKLTQDQDVDVKYFAQEALTVL------------------------SLA
10	SAM-T99	3gigA	0.244	0.348	4.390	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKLEDANERIA----------------------------------------------------------------------------------------------------------ELVKLEERQRIARDLHDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGILKDE---------IKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWK-EVVITVSDDGT----FKENSFSHGLLGMRERLEFANGSLHIDTE--NGTKLTMAIP----------

Predicted Tertiary Structure


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TM-score=0.465 to 1ys3B SCOP code=d.122.1.3	TM-score=0.647 to 1w63C SCOP code=i.23.1.1	TM-score=0.470 to 1ys3B SCOP code=d.122.1.3	TM-score=0.858 to 2ooeA SCOP code=a.118.8.7	TM-score=0.708 to 1qgkA SCOP code=a.118.1.1