Template-based Modeling Results for NARJ_ECOLI

Submitted Primary Sequence

>Length 236
MIELVIVSRLLEYPDAALWQHQQEMFEAIAASKNLPKEDAHALGIFLRDLTTMDPLDAQAQYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHGLQLNSRELPDHLPLYLEYLAQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVLFDLLLKLANTAIDSDKVAEKIADEARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRRFAGAVAPQYLNITTGGQH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIELVIVSRLLEYPDAALWQHQQEMFEAIAASKNLPKEDAHALGIFLRDLTTMDPLDAQAQYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHGLQLNSRELPDHLPLYLEYLAQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVLFDLLLKLANTAIDSDKVAEKIADEARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRRFAGAVAPQYLNITTGGQH
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIELVIVSRLLEYPDAALWQHQQEMFEAIAASKNLPKEDAHALGIFLRDLTTMDPLDAQAQYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHGLQLNSRELPDHLPLYLEYLAQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVLFDLLLKLANTAIDSDKVAEKIADEARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRRFAGAVAPQYLNITTGGQH
32001000200310322013103200300331331233103000200220232312100210021022132010000000222243002000200200132113132430120001001001212322023003100200110020035341310100000030032223232003322332333223101211333313112331112222212322222210010010232348
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIELVIVSRLLEYPDAALWQHQQEMFEAIAASKNLPKEDAHALGIFLRDLTTMDPLDAQAQYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHGLQLNSRELPDHLPLYLEYLAQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVLFDLLLKLANTAIDSDKVAEKIADEARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRRFAGAVAPQYLNITTGGQH
1	MUSTER	2o9xA	0.221	0.631	1.554	threading_1	REHLKLFSLIFSYPDEDKLGKAIALAEGIG------------LTEIAQTLKQVDIEALQVEYTSLFISSHPSVPCPYQSYFEEGSVYGKASLRAAELYSKYGLNYVYSEPPDHISVELEFLSN------PELLSDFRDWFLEFAKCVEEKSEIYATFARAFRKFLEK---------------------------------------------------------------------
2	SPARKS	1ze0a	0.213	0.636	2.048	threading_2	REHLKLFSLIFSYPDEDKLGKAIALAEGIGLTE------------IAQTLKQVDIEALQVEYTSLFISSHPSVPCPYQSYFEEGSVYGKASLRAAELYSKYGLNYVESEPPDHISVELEFLSMNPEL-----LSDFRDWFLEFAKCVEEKSEIYATFARAFRKFLEK---------------------------------------------------------------------
3	PROSPECT2	1ze0A	0.213	0.636	1.731	threading_3	REHLKLFSLIFSYPDEDKLGKAIALAE------------GIGLTEIAQTLKQVDIEALQVEYTSLFISSHPSVPCPPYSYFEEGSVYGKASLRAAELYSKYGLNYVESEPPDHISVELEFLSMN-----PELLSDFRDWFLEFAKCVEEKSEIYATFARAFRKFL---------------------------------------------------------------------EK
4	PPA-I	2o9xA	0.215	0.631	2.058	threading_4	REHLKLFSLIFSYPDEDKLGKAIALAEGIG------------LTEIAQTLKQVDIEALQVEYTSLFISSHPSVPCPYQSYFEEGSVYGKASLRAAELYSKYGLNYVYSEPPDHISVELEFLSNPE------LLSDFRDWFLEFAKCVEEKSEIYATFARAFRKFLEK---------------------------------------------------------------------
5	HHPRED-l	2o9x_A	0.224	0.623	5.250	threading_5	REHLKLFSLIFSYPDEDKLGKAIALAEGI-G---LTEIA--------QTLKQVDIEALQVEYTSLFIPSVPCPPYQSYFEEG--SVYGKASLRAAELYSKYGLNYVESEPPDHISVELEFLS--N----PELLSDFRDWFLEFAKCVEEKSEIYATFARAFRKFLEK---------------------------------------------------------------------
6	HHPRED-g	2o9x_A	0.221	0.631	4.489	threading_6	REHLKLFSLIFSYPDEDKLGKAIALAEGI-G---LTEIAQ--------TLKQVDIEALQVEYTSLFISSPSVPCPPYQSYFEEGSVYGKASLRAAELYSKYGLNYVESEPPDHISVELEFLS--N----PELLSDFRDWFLEFAKCVEEKSEIYATFARAFRKFLEK---------------------------------------------------------------------
7	SP3	1ze0a	0.220	0.636	2.098	threading_7	REHLKLFSLIFSYPDEDKLGKAIALAEGIG------------LTEIAQTLKQVDIEALQVEYTSLFISSHPSVPCPYQSYFEEGSVYGKASLRAAELYSKYGLNYVYSEPPDHISVELEFLSMN-----PELLSDFRDWFLEFAKCVEEKSEIYATFARAFRKFLEK---------------------------------------------------------------------
8	SAM-T99	2o9xA	0.226	0.619	3.354	threading_8	REHLKLFSLIFSYPDEDKLGKAIALAEGI------------GLTEIAQTLKQVDIEALQVEYTSLFISSHPCPPYQSYFE--EGSVYGKASLRAAELYSKYGLNYVESEPPDHISVELEFLS------NPELLSDFRDWFLEFAKCVEEKSEIYATFARAFRKFLE----------------------------------------------------------------------
9	MUSTER	3efpB	0.142	0.775	1.122	threading_9	MVAARVLGALFYYPESAEAAPLVAVLTSDGWETQWPLP-EASLAPLVTAFQTQCEETHAQAWQRLFVGALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFKQNEPEDHFGSLLLMAAWLQTECEELLAWHLFPWSTRFLDVFIEKEHPFYRALGELARLT-----LAQWQSQLLIPVAVKP------LFR-----------------------------------------
10	SPARKS	1s9ua	0.165	0.746	0.987	threading_10	AVTARVLGALFYYSSHETAPLVQALLNDWQAQWPLDAEALAPVAA----FKTHSEESLPQAWQRLFPYALPSPPWGSVWLDRESVLFGDSTLALRQWREN-----GIQEPEDHFGSLLLLAAWLRHHECEQLLAWLFPWSSRFLDVFIDHAG--HPFYQALGQLA-----RLTLAQWQAQLIIPVAVKPLFR--------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.768 to 2o9xA SCOP code=a.184.1.1	TM-score=0.771 to 2o9xA SCOP code=a.184.1.1	TM-score=0.758 to 2o9xA SCOP code=a.184.1.1	TM-score=0.767 to 2o9xA SCOP code=a.184.1.1	TM-score=0.764 to 2o9xA SCOP code=a.184.1.1