Template-based Modeling Results for NAPG_ECOLI

Submitted Primary Sequence

>Length 231
MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGVRLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGNNGKS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGVRLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGNNGKS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCEECCCCCCCCHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGVRLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGNNGKS
554324233212200210020000000000000002320323223221211131310020012011002103230010011222222222200011000111310100310222013432322331200000001332001230230210131022211001011122242233232112022210210010031012331002001111011201311210122134235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGVRLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGNNGKS
1	MUSTER	2vpzB	0.296	0.658	1.240	threading_1	----------------------------------------------MPRYAM---IDLSLCVGCAACAVACPPGVLWIREREVG-EYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKD--------GLVLVDPKKCIA-----CGACIAACPYDARYLHPAG--------------YVS--KCTFCPACVETCPTYCRTFGDLPESPVAKALKAAERVDVLRPEQGTR
2	SPARKS	1ti2b	0.162	0.723	2.244	threading_2	--------------------------------------------MEQYYMVID----VAKCQDCNNCFMGCRGHRWMNIERRERGTYPRNDINYRPTPCMHCENAPCVAKGN-GAVYQREDGI--------VLIDPEKA-----KGKKELLDTCPYGVMYWNEEENVAQKCTMCAHLLD--DESWAPKMPRCAHNCGSFVYEFLKTTPEAMAKKVEEEGLEVIKPELGTKP
3	PROSPECT2	1ti2B1	0.156	0.723	1.875	threading_3	ME--------QYYMVID----------------------------------------VAKCQDCNNCFMGCRGHRWMNIERRERGTYPRNDINYRPTPCMHCENAPCVAKGNGAVYQREDGI---------VLIDPEKA-----KGKKELLDTCPYGVMYWNEEENVAQKCTMCAHLLD--DESWAPKMPRCAHNCGSFVYEFLKTTPEAMAKKVEEEGLEVIKPEYRFEK
4	PPA-I	1ti4B1	0.168	0.723	1.434	threading_4	------------------------------------------------MEQYYMVIDVAKCQDCNNCFMGCNEWPGYTASMQRGHTYPRNDINYRPTPCMHCENAPCVAKGN-GAVYQREDGI--------VLIDPEKA-----KGKKELLDTCPYGVMYWNEEENVAQKCTMCAHLLDDESWAPKM--PRCAHNCGSFVYEFLKTTPEAMAKKVEEEGLEVIKPELGTKP
5	HHPRED-l	1kqf_B	0.215	0.766	3.089	threading_5	--AMETQDIIKRSAT-----------------NSITPPSQVRDYKAEVAKLID----VSTCIGCKACQVACSEWNDIRDEVGDTEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAIQYANGI--------VDFQSEN-----CIGCGYCIAGCPFNIPRLNKE--D-----------NR--VYKCTLCVACVKTCPTG--AIHFGTKKEMLEKLEHAGVYNPEGVGGTH-
6	HHPRED-g	1kqf_B	0.227	0.745	2.849	threading_6	------------------------------AMETQDIIKRSATNSITPPSQVRDYKAVSTCIGCKACQVACSEWNDIRDEFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAIIQYAN-------GIVDFQSENC-----IGCGYCIAGCPFNIPRLNKED-------------N--RVYKCTLCVACVKTCPTGA--IHFGTKKEMEQRVHVMYVLHHADQPELYH
7	SP3	2vpwb	0.239	0.706	2.097	threading_7	----------------------------------------------MPRYAM--AIDLSLCVGCAACAVACPPGVFNLWIREREVEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDGL--------VLVDPKKC-----IACGACIAACPYDARYL-------HPAGYVSKCTFCAHRLEKGKVPACVETCPTYCRTFGDLPESPVAKALKAAFYLNAPSKRESEV
8	SAM-T99	2vpzB	0.289	0.554	4.042	threading_8	---------------------------------------------------YAMAIDLSLCVGCAACAVACPPGVFNLWIREREVEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTK--------DGLVLVDPKKCI-----ACGACIAACPY--DARYLHPAGY--------------VSKCTFCPACVETCPTYCRTFGDLED-----------------------
9	MUSTER	1ti4B1	0.187	0.649	1.130	threading_9	---------------------------------------------------MEQ-IDVAKCQDCNNCFMGCNEWPGYTASMQRGHRYPRNDINYRPTPCMHCENAPCVAKGN-GAVYQRED--------GIVLIDPEKAKG-----KKELLDTCPYGVMYWNEEEN-------------VAQ--KCTMCPRCAHNCGSFVYEFLKTTPEAMAKKVEEEGLEVIKPELGTKP
10	SPARKS	2vpwb	0.236	0.680	2.178	threading_10	--------------------------------------------MPRYAMAID----LSLCVGCAACAVACPPGVFNLWIRREVGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDGL--------VLVDPKKC-----IACGACIAACPYDARYL-------HPAGYVSKCTFCAHRLEKGKVPACVETCPTYC--RTFGDLEDPESPVAKALKA----AERVDV

Predicted Tertiary Structure


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TM-score=0.626 to 1ti4B SCOP code=b.3.5.1	TM-score=0.768 to 1ti4B SCOP code=b.3.5.1	TM-score=0.768 to 1ti4B SCOP code=b.3.5.1	TM-score=0.754 to 1ti4B SCOP code=b.3.5.1	TM-score=0.752 to 1ti4B SCOP code=b.3.5.1