Template-based Modeling Results for NAPF_ECOLI

Submitted Primary Sequence

>Length 164
MKIDASRRGILTGRWRKASNGIRPPWSGDESHFLTHCTRCDACINACENNILQRGAGGYPSVNFKNNECSFCYACAQACPESLFSPRHTRAWDLQFTIGDACLAYQSVECRRCQDSCEPMAIIFRPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEYLHAH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKIDASRRGILTGRWRKASNGIRPPWSGDESHFLTHCTRCDACINACENNILQRGAGGYPSVNFKNNECSFCYACAQACPESLFSPRHTRAWDLQFTIGDACLAYQSVECRRCQDSCEPMAIIFRPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEYLHAH
CCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCEECHHHCCCCCHHHHHCCCCCEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKIDASRRGILTGRWRKASNGIRPPWSGDESHFLTHCTRCDACINACENNILQRGAGGYPSVNFKNNECSFCYACAQACPESLFSPRHTRAWDLQFTIGDACLAYQSVECRRCQDSCEPMAIIFRPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEYLHAH
55231111111223243223112022113221002101301100200223002113211100102332021021003001311122332221312121010001231230220121031101213222222321201131011000002101121010121335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKIDASRRGILTGRWRKASNGIRPPWSGDESHFLTHCTRCDACINACENNILQRGAGGYPSVNFKNNECSFCYACAQACPESLFSPRHTRAWDLQFTIGDACLAYQSVECRRCQDSCEPMAIIFRPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEYLHAH
1	MUSTER	2vkrA	0.224	0.598	1.475	threading_1	--------------------------GIDPNYRTSRHQGHKVYGPVDPPKVLGIHGT---IVGVDFDLCIADGSCITACPVNVFQWYDTPGH----------------------------------PASEKKADPINEQACIFCMACVNVCPVAAIDVKPP---
2	SPARKS	2fug9	0.143	0.768	1.661	threading_2	--------------YPDAPVALKPHVLTRHPNGLEKCIGCSLCAAACPAYAIYVEPAENKVYEINMLRCIFCGLCEEACPTGAIVLGYDFEMADDLVYGKEDMLVDVVGTKPQRREAKRTGKPVKVGYVVPYVRKAPTEG------------------------
3	PROSPECT2	1ti2B1	0.140	0.787	1.397	threading_3	MEIDVAKDEHELNEWPGYTASMQRGHRWMNIERREPCMHCENCVAKGNGAVYQREDGI---VLIDPEKAKGKKELLDTCPYGVMYWNEEENV--------------AQKCTMCAHLLD------------------DESWAPKMPRCAHNCGSFVYEFLKTTPK
4	PPA-I	2vkrA	0.173	0.598	1.749	threading_4	--------------------------GIDPNYRTSRHQGHKVYGPVDPPKVLGIHGTI---VGVDFDLCIADGSCITACPVNVFQWYDTPGHPASEKKADPINEQACIFCMACVNVCPVAAIDVKPP-------------------------------------
5	HHPRED-l	1kqf_B	0.178	0.890	2.668	threading_5	---AMETQDIIK---RSATNSITPPSQVAKLIDVSTCIGCKACQVACSEWNDIRDEVGHCVGVYDN-PADLSAKSW------TVMRFSETEQNGKLEWLIRKD----GCMHCEDPGCLKACPSGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDN-
6	HHPRED-g	1kqf_B	0.229	0.878	2.418	threading_6	---AMETQDIIK---RSATNSITPPSQVRDYKAVSTCIGCKACQVACSEEVSETEQNGKLEWLIRKDGCMHCEGCLKACPSAGAIIQ--YANGIVDFQSENC-----IGCGYCIAGCPFNIPRLNKEDNRV-------YKCTLCVACVKTCPTGAIHFGTKKEE
7	SP3	1xer_	0.235	0.622	0.827	threading_7	-GIDPNYRTNRQVVGEHSGHKVYGP------------------VEPPVLGIH------GTIVGVDFDLCIADGSCINACPVNVFQWYDTPGHPASE----------------------------------KKADPVNEQACIFCMACVNVCPVAAIDVKPP---
8	SAM-T99	2vpzB	0.257	0.689	2.418	threading_8	----------------------MPRYAMA--IDLSLCVGCAACAVACPPGVFNVGEYPNLVVEFRPEQCLHCPPCVPVCPTGASY---QTKDGLVLVDPKKC-----IACGACIAACPYDARYL--------HPAGYVSKCTFCPACVETCPT-----------
9	MUSTER	3iasY	0.147	0.829	1.377	threading_9	--------------YPDAPVALKPHVLTRHPNGLEKCIGCSLCAAACPAYAIYVEERYAKVYEINMLRCIFCGLCEEACPTGAIVLGYDFEMADYEYSDLVYGKEDMLVDVVGTKPQRREAKRTGKPVKVGYVVPYVRPELEGFKA-----PTEG---------
10	SPARKS	7fd1a	0.146	0.628	1.649	threading_10	-----------------------------AFVVTDNCIKCKYCVEVCPVDCFYEGPNF---LVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQEFIQLNAELAEVWP-NITEKKDPLDAEDWDGVKGKLQHLER----------------------------

Predicted Tertiary Structure


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TM-score=0.555 to 1durA SCOP code=d.58.1.1	TM-score=0.553 to 1sizA SCOP code=d.58.1.4	TM-score=0.520 to 1durA SCOP code=d.58.1.1	TM-score=0.658 to 1ti4B SCOP code=b.3.5.1	TM-score=0.570 to 1jb0C SCOP code=d.58.1.2