Template-based Modeling Results for NAPC_ECOLI

Submitted Primary Sequence

>Length 200
MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIRKLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTAQKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIRKLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTAQKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIRKLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTAQKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF
55434422110220021112122001000000000000000000100133032320000012123101321131112323210101011020133011100111311210101000112123313232221022003203312131011012222231222322002102201432310010030001301314323324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIRKLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTAQKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF
1	MUSTER	2j7aR	0.259	0.715	2.224	threading_1	---------------------------KLVLGGATLGVVALATVAFGMKYTDQRPFCTSCHIM-NPVGVTHKLSGH------ANISCNDCHAPHNLLAKLPFKAIAARDVYMNTLGHPGDLILAG-----------METKEVVNANCKACHTMTNVEVASME------------AKKYCTDCHRNVQHMRMKPISTREVA
2	SPARKS	2j7ac	0.273	0.715	4.372	threading_2	---------------------------KLVLGGATLGVVALATVAFGMKYTDQRPFCTSCHIM-NPVGVTHKLSGH------ANISCNDCHAPHNLLAKLPFKAIAARDVYMNTLGHPGDLI--------LAGMETKEVVN---ANCKACHTMTNVEVASME------------AKKYCTDCHRNVQHMMKPISTREVAD
3	PROSPECT2	2j7aC	0.231	0.715	1.765	threading_3	KLVLG---------------------------GATLGVVALATVAFGMKYTDQRPFCTSCHIMNPV-GVTHKLSGHANIS------CNDCHAPHNLLAKLPFKIAGARDVYMNTLGHPGDLILAG-----------METKEVVNANCKACHTMTNVEVASME------------AKKYCTDCHRNVQHMRMKPISTREAD
4	PPA-I	2j7aR	0.259	0.715	4.260	threading_4	---------------------------KLVLGGATLGVVALATVAFGMKYTDQRPFCTSCHIM-NPVGVTHKLSGH------ANISCNDCHAPHNLLAKLPFKAIAARDVYMNTLGHPGDLILAG-----------METKEVVNANCKACHTMTNVEVASME------------AKKYCTDCHRNVQHMRMKPISTREVA
5	HHPRED-l	2j7a_C	0.257	0.700	6.411	threading_5	---------------------------KLVLGGATLGVVALATVAFGMKYTDQRPFCTSCHIMN-PVGVTHKLSGHAN------ISCNDCHAPHNLLAKLPFKAAGARDVYMNTLGHPGDLILAGMETKEVVN-----------ANCKACHTMTNVEVAS------------MEAKKYCTDCHRNVQHMR--MKPISTR-
6	HHPRED-g	2j7a_C	0.259	0.715	6.200	threading_6	---------------------------KLVLGGATLGVVALATVAFGMKYTDQRPFCTSCHIMN-PVGVTHKLSGHAN------ISCNDCHAPHNLLAKLPFKAIAARDVYMNTLGHPGDLILAGMETKEVVN-----------ANCKACHTMTNVEVAS------------MEAKKYCTDCHRNVQHMRMKPISTEVAD
7	SP3	2j7ac	0.280	0.715	1.584	threading_7	---------------------------KLVLGGATLGVVALATVAFGMKYTDQRPFCTSCHIM-NPVGVTHKLSGH------ANISCNDCHAPHNLLAKLPFKAIAARDVYMNTLG--------HPGDLILAGMETKEVVN---ANCKACHTMTNVEVASME------------AKKYCTDCHRNVQHMRKPISTREVAD
8	SAM-T99	2j7aR	0.264	0.700	3.337	threading_8	---------------------------KLVLGGATLGVVALATVAFGMKYTDQRPFCTSCHIM-NPVGVTHKLSGHANI------SCNDCHAPHNLLAKLPFKAIGARDVYMNTLGHPGDLILAG-----------METKEVVNANCKACHTMTNVEV------------ASMEAKKYCTDCHRNVQHMRMKPISTR---
9	MUSTER	1ft5A	0.151	0.895	0.743	threading_9	EGRKK--SSCHKAQAQSWKDTAHAKAMESLKPNVKKEAKQKAKLDPAKDYTQDKD-CVGCHVDGFGQKGGYTIESPKPMLTGV--GCESCHGPGRNFRGDHRKSGQAFE-----------KSGKKTPRKDLAKKG---QDFHFEERCSACHPYTPFTPEVDAKYTFKFDEMVKEVKA--MHEHEGVFEGEPKFKSAKPAK
10	SPARKS	1sp3a	0.193	0.805	0.815	threading_10	--------------------------------ANPHKDVLKGPFTTGSEVT---TQCLTCH---EEQATDMMKTSHWTNFCVAEPRCTSCHAGYGWKDTFDFKDKTKVDCLI-CHDTTGTYVKDPAGAGEPLAKIAQNVGAPVRDNCGSCHFYGKHGDLDSSMAYPDKHMDSDGNNFQCQNCHTTEKHQISNAMGVSPGG

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.395 to 1fgjA SCOP code=a.138.1.3	TM-score=0.403 to 2f5cA SCOP code=a.4.5.24	TM-score=0.400 to 2f5cA SCOP code=a.4.5.24	TM-score=0.405 to 1t9sA SCOP code=a.211.1.2	TM-score=0.395 to 1fgjA SCOP code=a.138.1.3