Template-based Modeling Results for NANM_ECOLI

Submitted Primary Sequence

>Length 368
MNKTITALAIMMASFAANASVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNKTITALAIMMASFAANASVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN
CCCEEEEEEEECCCCCCEEEECCCCCCCCCCCEEEEECCEEEEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCEEECCEEEEECCCCEEEECCCCCCCCEEEEEEEEECCEEEEEECCCCCEECCCEEEECCCCCCCCHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCCHHHCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCEEEEEEEECCEEEEEECCCCCCCEEEEEEEEEECCCEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKTITALAIMMASFAANASVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN
55311001001122221102101302211310000002100000101112100000031433201201212222222000000201000000114323322100220000005211002012223200000000012010000001232101110100132233122113230100123132121121000000321200101302220100000001111000010213212312100000000121100201212222000000000021000000011142123112212010121143221110001331202201401211000000002100000002123230001000010332202133
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNKTITALAIMMASFAANASVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN
1	MUSTER	2uvkB	0.986	0.940	3.137	threading_1	-------------------SVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLSHA---PGAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN
2	SPARKS	2uvka	0.953	0.921	5.592	threading_2	-------------------SVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLSHAPGAG---HVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDA---VFELDFTLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHL---WHWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVD-NKVTVQN
3	PROSPECT2	2uvkA	0.962	0.921	3.853	threading_3	-------------------SVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLS---HAPGAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELD---FTLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHL---WHWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVDNKV-TVQN
4	PPA-I	2uvkB	0.983	0.940	3.934	threading_4	-------------------SVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLSHAPGAG---HVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN
5	HHPRED-l	2uvk_A	1.000	0.916	5.227	threading_5	-------------------SVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKL-SHAP---AGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFT---LKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH---WDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITV-DNKVTVQ-
6	HHPRED-g	2uvk_A	0.979	0.916	3.630	threading_6	-------------------SVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKL-SHAP---AGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTD--AVFELDF--LKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH---WDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITV-DNKVTVQN
7	SP3	2xn4a	0.188	0.739	5.660	threading_7	QAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGRTVDSYDPV--KDQWTSVANM-RDRRSTLGAAVLNGLLYAVGGFDGST-----GLSSVEAYNIKSNEWFHVAPMN-TRRSSVGVGVVGGLLYAVGGYDV--------------------------------ASRQCLSTVECYNATTNEWTYIAEM-STRRSGAGVGVLNNLLYAVGGHDGPLVRK---SVEVYDPTTNAWRQVADMNMC--RRNAGVCAVNGLLYVVGG-----------------DDGSCNLASVEYYNPTTDKWTVVSSMSTGRSYAGVTVIDK--------------------------------
8	SAM-T99	2uvkB	0.986	0.940	5.404	threading_8	-------------------SVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLSHA---PGAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN
9	MUSTER	2dyhA	0.164	0.764	2.327	threading_9	------------------------------------VGRLIYTAGGYFRQSLYLEAYNPSNGSWLRLADLQ-VPRSGLAGCVVGGLLYAVGGRN-NSPDGNTDSSALDCYNPMTNQWSPCAS-MSVPRNRIGVGVIDGHIYAVGGSHGCIHHSSVERYEPERDEWHLVAPMLTRYAVGGFDGTNRLNSAECYYPERNEWRMITPMN-TIRSGAGVCVLHNCIYAAGGYDGQDQLN---SVERYDVETETWTFVAPMRHHRS--ALGITVHQGKIYVLGG-----------------YDGHTFLDSVECYDPDSDTWSEVTRMTSGRSGVGVAVTME-------------------------CRKQIDQ
10	SPARKS	2xn4a	0.188	0.739	5.580	threading_10	QAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSTVDSYDPV--KDQWTSVANM-RDRRSTLGAAVLNGLLYAVGGFDGSTG-----LSSVEAYNIKSNEWFHVAPM-NTRRSSVGVGVVGGLLYAVGGYDVA--------------------------------SRQCLSTVECYNATTNEWTYIAEMS-TRRSGAGVGVLNNLLYAVGGHDGPLVRKS---VEVYDPTTNAWRQVADMNMC--RRNAGVCAVNGLLYVVGG-----------------DDGSCNLASVEYYNPTTDKWTVVSSMSTGRSYAGVTVIDK--------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.750 to 2dyhA TM-score=0.998 to native SCOP code=b.68.11.1	TM-score=0.750 to 2dyhA TM-score=0.998 to native SCOP code=b.68.11.1	TM-score=0.739 to 2dyhA TM-score=0.985 to native SCOP code=b.68.11.1	TM-score=0.740 to 2dyhA TM-score=0.985 to native SCOP code=b.68.11.1	TM-score=0.748 to 2dyhA TM-score=0.998 to native SCOP code=b.68.11.1

Experimental Structure

Download 2uvkB

SCOP code=b.68.11.1