Template-based Modeling Results for NANC_ECOLI


  Submitted Primary Sequence

>Length 238
MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
CCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCEEEEECCCCEEEEEEEEEEEEECCCEEEEEEEEHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEEEEEECCCEECCCCCCCEEEEEEEEEEEECCCEEEEEEEEEEECCCEECCCCCCCCCEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
4321111000000000000112100010101022224211110100100421010001011222232343320212101020000020332000100000111331120000020001014200000100011311333322232243211100000002012201010100001222212123444110100010102013300000100102332222343322210001001132
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
1MUSTER2wjqA1.0000.8613.266threading_1-----------------------ATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTI----------NDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
2SPARKS2wjqa0.9900.8616.683threading_2-----------------------ATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWN----------TINDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
3PROSPECT22wjqA0.9900.8613.483threading_3-----------------------ATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWN----------TINDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
4PPA-I2wjqA0.9950.8617.978threading_4-----------------------ATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNT----------INDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
5HHPRED-l2wjr_A0.9950.85310.999threading_5------------------------ALDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTI----------NDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFK-
6HHPRED-g2wjr_A0.9950.8579.719threading_6------------------------ALDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTI----------NDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
7SP32wjqa0.9900.8615.745threading_7-----------------------ATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWN----------TINDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
8SAM-T992wjqA0.9900.8618.783threading_8-----------------------ATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWN----------TINDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL
9MUSTER1phoA0.0570.9661.076threading_9YGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFG-GSDFAISGAYTNSDRTNERAEAWATGLKYDA-NNIYLATFYSE----TRKMTPITGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDI-EGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSD-NKLNINNDDIVAVGMTYQF
10SPARKS1t16a0.1011.0001.124threading_10SRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKAPNMHFVAPINDQFGWGASILATEFNDTYAGGSVGGTTMNLNLSGAYRLNNAWSFGLGFNAVYARNQWGFGWNAGILYELDKNNRYALTYRSRAFNNYGLPIPTATGGATPEMWEVSGYNRVDPQWAIHYSLAYTSWSQKATSTSGDKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSDQDRFWLSAGTTYAF

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.655 to 1tlzA
TM-score=0.998 to native
SCOP code=f.4.6.1		 TM-score=0.655 to 1tlzA
TM-score=0.998 to native
SCOP code=f.4.6.1		 TM-score=0.655 to 1tlzA
TM-score=0.967 to native
SCOP code=f.4.6.1		 TM-score=0.655 to 1tlzA
TM-score=0.967 to native
SCOP code=f.4.6.1		 TM-score=0.655 to 1tlzA
TM-score=0.980 to native
SCOP code=f.4.6.1

  Experimental Structure

Download 2wjqA
SCOP code=f.4.6.1